MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region X:37167588-37211163

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Akap14	X	37150698 to 37168842	18144	-	protein coding gene	A kinase (PRKA) anchor protein 14
Gm39503	X	37154190 to 37172730	18540	+	lncRNA gene	predicted gene, 39503
Tssr163157	X	37168829 to 37168854	25	-	TSS region	transcription start site region 163157
Tssr160765	X	37172441 to 37172449	8	+	TSS region	transcription start site region 160765
Gm33339	X	37172741 to 37178138	5397	+	lncRNA gene	predicted gene, 33339
Tssr160766	X	37178179 to 37178181	2	+	TSS region	transcription start site region 160766
Tssr160767	X	37179598 to 37179607	9	+	TSS region	transcription start site region 160767
Ndufa1	X	37187588 to 37191163	3575	-	protein coding gene	NADH:ubiquinone oxidoreductase subunit A1
Tssr160768	X	37190440 to 37190444	4	+	TSS region	transcription start site region 160768
Cpgi22675	X	37190916 to 37192102	1186		CpG island	CpG island 22675
Tssr163158	X	37191104 to 37191148	44	-	TSS region	transcription start site region 163158
Tssr163159	X	37191160 to 37191196	36	-	TSS region	transcription start site region 163159
Tssr160769	X	37191220 to 37191320	100	+	TSS region	transcription start site region 160769
Rnf113a1	X	37191245 to 37192467	1222	+	protein coding gene	ring finger protein 113A1
Tssr163160	X	37194799 to 37194800	1	-	TSS region	transcription start site region 163160
Gm9	X	37209348 to 37211041	1693	-	protein coding gene	predicted gene 9
Tssr163161	X	37210998 to 37211010	12	-	TSS region	transcription start site region 163161
Tssr163162	X	37211045 to 37211054	9	-	TSS region	transcription start site region 163162