Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:35856807-36366836

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41 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr163126 X 35881419 to 35881423 4 - TSS region transcription start site region 163126
Cpgi22658 X 35888547 to 35889527 980 CpG island CpG island 22658
Tssr160723 X 35888623 to 35888634 11 + TSS region transcription start site region 160723
Tssr160724 X 35888638 to 35888683 45 + TSS region transcription start site region 160724
Tssr160725 X 35888685 to 35888709 24 + TSS region transcription start site region 160725
Tssr160726 X 35888722 to 35888733 11 + TSS region transcription start site region 160726
Tssr160727 X 35888782 to 35888792 10 + TSS region transcription start site region 160727
Tssr160728 X 35888808 to 35888859 51 + TSS region transcription start site region 160728
Dock11 X 35888832 to 36076562 187730 + protein coding gene dedicator of cytokinesis 11
Tssr160729 X 35891238 to 35891242 4 + TSS region transcription start site region 160729
Tssr160730 X 35897833 to 35897837 4 + TSS region transcription start site region 160730
Bmiq12 X 36000000 to 78000000 42000000 QTL body mass index QTL 12
Gm32904 X 36020387 to 36027644 7257 - lncRNA gene predicted gene, 32904
Tssr163127 X 36025841 to 36025860 19 - TSS region transcription start site region 163127
DXMit238 X 36082126 to 36082228 102 DNA segment DNA Segment, Chr X, Massachusetts Institute of Technology-238
Tssr160731 X 36111807 to 36111836 29 + TSS region transcription start site region 160731
Cpgi22659 X 36111845 to 36112569 724 CpG island CpG island 22659
Tssr160732 X 36112072 to 36112083 11 + TSS region transcription start site region 160732
Tssr160733 X 36112097 to 36112113 16 + TSS region transcription start site region 160733
Il13ra1 X 36112110 to 36171259 59149 + protein coding gene interleukin 13 receptor, alpha 1
Tssr160734 X 36112114 to 36112172 58 + TSS region transcription start site region 160734
Gm42406 X 36137892 to 36196095 58203 - lncRNA gene predicted gene, 42406
Tssr5607 X 36152051 to 36152089 38 + TSS region transcription start site region 5607
Zcchc12 X 36195904 to 36199158 3254 + protein coding gene zinc finger, CCHC domain containing 12
Tssr160735 X 36195928 to 36195932 4 + TSS region transcription start site region 160735
Tssr160736 X 36195938 to 36195945 7 + TSS region transcription start site region 160736
Tssr160737 X 36195950 to 36195959 9 + TSS region transcription start site region 160737
Tssr160738 X 36195968 to 36195993 25 + TSS region transcription start site region 160738
DXMit81 X 36201307 to 36201506 199 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 81
Gm14560 X 36212660 to 36213034 374 - pseudogene predicted gene 14560
Gm6023 X 36213524 to 36214129 605 - pseudogene predicted gene 6023
Gm14559 X 36302113 to 36302608 495 - pseudogene predicted gene 14559
Lonrf3 X 36328353 to 36362341 33988 + protein coding gene LON peptidase N-terminal domain and ring finger 3
Cpgi22660 X 36328359 to 36329703 1344 CpG island CpG island 22660
Tssr160739 X 36328399 to 36328418 19 + TSS region transcription start site region 160739
Tssr160740 X 36328420 to 36328441 21 + TSS region transcription start site region 160740
Cpgi22661 X 36329819 to 36330457 638 CpG island CpG island 22661
Tssr160741 X 36336701 to 36336714 13 + TSS region transcription start site region 160741
Tssr160742 X 36346204 to 36346210 6 + TSS region transcription start site region 160742
Tssr160743 X 36350959 to 36350961 2 + TSS region transcription start site region 160743
Gm25047 X 36363899 to 36364002 103 + snRNA gene predicted gene, 25047