Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:22784415-28574520

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89 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm26131 X 22861936 to 22862045 109 + snRNA gene predicted gene, 26131
Tssr160714 X 23115592 to 23115595 3 + TSS region transcription start site region 160714
Klhl13 X 23219271 to 23365082 145811 - protein coding gene kelch-like 13
Tssr5603 X 23232403 to 23232408 5 + TSS region transcription start site region 5603
Tssr163116 X 23266751 to 23266806 55 - TSS region transcription start site region 163116
Tssr163117 X 23284603 to 23284618 15 - TSS region transcription start site region 163117
Tssr163118 X 23285445 to 23285454 9 - TSS region transcription start site region 163118
Tssr163119 X 23285532 to 23285578 46 - TSS region transcription start site region 163119
Tssr163120 X 23296067 to 23296109 42 - TSS region transcription start site region 163120
Tssr163121 X 23296397 to 23296417 20 - TSS region transcription start site region 163121
Tssr163122 X 23318896 to 23318909 13 - TSS region transcription start site region 163122
Tssr163123 X 23361687 to 23361702 15 - TSS region transcription start site region 163123
Gm14523 X 23364506 to 23365063 557 - pseudogene predicted gene 14523
Cpgi22655 X 23364612 to 23365161 549 CpG island CpG island 22655
Tssr163124 X 23365008 to 23365043 35 - TSS region transcription start site region 163124
Tssr163125 X 23365044 to 23365090 46 - TSS region transcription start site region 163125
Gm7164 X 23399030 to 23399479 449 - pseudogene predicted gene 7164
Tssr160715 X 23689017 to 23689020 3 + TSS region transcription start site region 160715
Cpgi22656 X 23692723 to 23693492 769 CpG island CpG island 22656
Tssr160716 X 23693043 to 23693131 88 + TSS region transcription start site region 160716
Wdr44 X 23693051 to 23806025 112974 + protein coding gene WD repeat domain 44
Tssr160717 X 23693484 to 23693494 10 + TSS region transcription start site region 160717
Tssr160718 X 23705956 to 23705982 26 + TSS region transcription start site region 160718
Gm18938 X 23719440 to 23720036 596 + pseudogene predicted gene, 18938
Gm4789 X 23854819 to 23856034 1215 - pseudogene predicted gene 4789
Gm4907 X 23882553 to 23907607 25054 + protein coding gene predicted gene 4907
Gm4985 X 23957702 to 23958934 1232 - protein coding gene predicted gene 4985
Gm25299 X 23982185 to 23982286 101 + miRNA gene predicted gene, 25299
Tssr160719 X 24008460 to 24008505 45 + TSS region transcription start site region 160719
Tssr160720 X 24008645 to 24008696 51 + TSS region transcription start site region 160720
Tssr160721 X 24008706 to 24008717 11 + TSS region transcription start site region 160721
Gm4732 X 24242173 to 24264917 22744 - pseudogene predicted gene 4732
Gm9440 X 24319797 to 24335259 15462 + pseudogene predicted gene 9440
Gm6956 X 24407179 to 24418902 11723 - pseudogene predicted gene 6956
Gm27192 X 24422751 to 24424779 2028 - lincRNA gene predicted gene 27192
Gm5934 X 24474308 to 24499163 24855 - protein coding gene predicted gene 5934
Gm4297 X 24552250 to 24573305 21055 - protein coding gene predicted gene 4297
Gm41894 X 24597569 to 24599023 1454 + lncRNA gene predicted gene, 41894
Gm27910 X 24617011 to 24617117 106 - miRNA gene predicted gene, 27910
Gm27839 X 24617213 to 24617318 105 - miRNA gene predicted gene, 27839
Gm5935 X 24753162 to 24775164 22002 - protein coding gene predicted gene 5935
Gm2759 X 24948574 to 24969751 21177 - pseudogene predicted gene 2759
Gm44480 X 24969994 to 24970079 85 + miRNA gene predicted gene, 44480
4930557B15Rik X 24971459 to 25404966 433507 + lncRNA gene RIKEN cDNA 4930557B15 gene
Gm42218 X 25068487 to 25084772 16285 + lncRNA gene predicted gene, 42218
Gm2768 X 25112160 to 25115171 3011 - pseudogene predicted gene 2768
Gm5169 X 25277605 to 25301455 23850 - protein coding gene predicted gene 5169
Gm1989 X 25359128 to 25380281 21153 - pseudogene predicted gene 1989
Gm1993 X 25548501 to 25570449 21948 - protein coding gene predicted gene 1993
Gm2003 X 25622512 to 25643661 21149 - pseudogene predicted pseudogene 2003
Gm42168 X 25660194 to 25661726 1532 + lncRNA gene predicted gene, 42168
Gm27892 X 25679415 to 25679520 105 - miRNA gene predicted gene, 27892
Cpgi22657 X 25752669 to 25752861 192 CpG island CpG island 22657
Gm7350 X 25824490 to 25845667 21177 - pseudogene predicted gene 7350
E330010L02Rik X 25917944 to 25954696 36752 - lincRNA gene RIKEN cDNA E330010L02 gene
Gm42169 X 25990801 to 25992379 1578 - lncRNA gene predicted gene, 42169
Gm14533 X 26006671 to 26006763 92 + pseudogene predicted gene 14533
Gm5168 X 26028214 to 26051041 22827 - protein coding gene predicted gene 5168
Gm42170 X 26065799 to 26067381 1582 + lncRNA gene predicted gene, 42170
Gm2012 X 26200882 to 26231323 30441 - protein coding gene predicted gene 2012
Gm26302 X 26229981 to 26230066 85 + miRNA gene predicted gene, 26302
Gm2030 X 26287199 to 26310044 22845 - protein coding gene predicted gene 2030
Gm42171 X 26324958 to 26326466 1508 + lncRNA gene predicted gene, 42171
Gm2036 X 26414963 to 26415310 347 - protein coding gene predicted gene 2036
Gm2005 X 26476061 to 26487573 11512 - pseudogene predicted pseudogene 2005
Slx X 26522657 to 26545565 22908 - protein coding gene Sycp3 like X-linked
Gm27341 X 26579877 to 26579982 105 - miRNA gene predicted gene, 27341
Gm14525 X 26672780 to 26702638 29858 - protein coding gene predicted gene 14525
Gm6113 X 26735065 to 26756219 21154 - pseudogene predicted gene 6113
Gm6121 X 26912743 to 26935669 22926 - protein coding gene predicted gene 6121
Gm7365 X 27005304 to 27011580 6276 - pseudogene predicted gene 7365
Gm42172 X 27028143 to 27029639 1496 + lncRNA gene predicted gene, 42172
Gm7375 X 27334822 to 27356109 21287 + pseudogene predicted pseudogene 7375
Gm42101 X 27383478 to 27399767 16289 - lncRNA gene predicted gene, 42101
Gm10230 X 27472031 to 27494882 22851 - protein coding gene predicted gene 10230
Gm44452 X 27493556 to 27493641 85 + miRNA gene predicted gene, 44452
Gm2092 X 27577198 to 27598375 21177 - pseudogene predicted gene 2092
Gm44407 X 27598618 to 27598703 85 + miRNA gene predicted gene, 44407
Gm2101 X 27658190 to 27691942 33752 + lincRNA gene predicted gene 2101
Gm7386 X 27771601 to 27792613 21012 + pseudogene predicted pseudogene 7386
Gm42173 X 27829724 to 27851511 21787 - lncRNA gene predicted gene, 42173
Gm10058 X 27924021 to 27946885 22864 - protein coding gene predicted gene 10058
Gm2117 X 28005050 to 28047399 42349 + lincRNA gene predicted gene 2117
Gm7391 X 28127898 to 28148926 21028 + pseudogene predicted pseudogene 7391
Gm42175 X 28183124 to 28199245 16121 - lncRNA gene predicted gene, 42175
Gm4836 X 28270710 to 28293632 22922 - protein coding gene predicted gene 4836
Gm42176 X 28328661 to 28330036 1375 + lncRNA gene predicted gene, 42176
Gm7398 X 28447594 to 28468864 21270 + pseudogene predicted gene 7398
Gm42177 X 28496223 to 28512522 16299 - lncRNA gene predicted gene, 42177