Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:21874271-24710082

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54 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm24535 X 21901732 to 21901838 106 - snRNA gene predicted gene, 24535
Gm14563 X 22205170 to 22205523 353 - pseudogene predicted gene 14563
Gm14561 X 22226375 to 22228343 1968 - pseudogene predicted gene 14561
Gm6071 X 22305800 to 22306274 474 - pseudogene predicted gene 6071
Gm25812 X 22434414 to 22434516 102 + snRNA gene predicted gene, 25812
Gm14562 X 22438876 to 22439418 542 - pseudogene predicted gene 14562
Gm15030 X 22446056 to 22446539 483 + pseudogene predicted gene 15030
DXMit125 X 22456250 to 22456375 125 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 125
Tssr160712 X 22461630 to 22461641 11 + TSS region transcription start site region 160712
Ppp1r2-ps7 X 22461632 to 22462394 762 + pseudogene protein phosphatase 1, regulatory (inhibitor) subunit 2, pseudogene 7
Tssr160713 X 22461650 to 22461652 2 + TSS region transcription start site region 160713
4930554N03Rik X 22638327 to 22686846 48519 unclassified gene RIKEN cDNA 4930554N03 gene
DXMit90 X 22658318 to 22658418 100 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 90
DXMit188 X 22754150 to 22754254 104 DNA segment DNA Segment, Chr X, Massachusetts Institute of Technology 188
Gm26131 X 22861936 to 22862045 109 + snRNA gene predicted gene, 26131
Tssr160714 X 23115592 to 23115595 3 + TSS region transcription start site region 160714
Klhl13 X 23219271 to 23365082 145811 - protein coding gene kelch-like 13
Tssr5603 X 23232403 to 23232408 5 + TSS region transcription start site region 5603
Tssr163116 X 23266751 to 23266806 55 - TSS region transcription start site region 163116
Tssr163117 X 23284603 to 23284618 15 - TSS region transcription start site region 163117
Tssr163118 X 23285445 to 23285454 9 - TSS region transcription start site region 163118
Tssr163119 X 23285532 to 23285578 46 - TSS region transcription start site region 163119
Tssr163120 X 23296067 to 23296109 42 - TSS region transcription start site region 163120
Tssr163121 X 23296397 to 23296417 20 - TSS region transcription start site region 163121
Tssr163122 X 23318896 to 23318909 13 - TSS region transcription start site region 163122
Tssr163123 X 23361687 to 23361702 15 - TSS region transcription start site region 163123
Gm14523 X 23364506 to 23365063 557 - pseudogene predicted gene 14523
Cpgi22655 X 23364612 to 23365161 549 CpG island CpG island 22655
Tssr163124 X 23365008 to 23365043 35 - TSS region transcription start site region 163124
Tssr163125 X 23365044 to 23365090 46 - TSS region transcription start site region 163125
Gm7164 X 23399030 to 23399479 449 - pseudogene predicted gene 7164
Tssr160715 X 23689017 to 23689020 3 + TSS region transcription start site region 160715
Cpgi22656 X 23692723 to 23693492 769 CpG island CpG island 22656
Tssr160716 X 23693043 to 23693131 88 + TSS region transcription start site region 160716
Wdr44 X 23693051 to 23806025 112974 + protein coding gene WD repeat domain 44
Tssr160717 X 23693484 to 23693494 10 + TSS region transcription start site region 160717
Tssr160718 X 23705956 to 23705982 26 + TSS region transcription start site region 160718
Gm18938 X 23719440 to 23720036 596 + pseudogene predicted gene, 18938
Gm4789 X 23854819 to 23856034 1215 - pseudogene predicted gene 4789
Gm4907 X 23882553 to 23907607 25054 + protein coding gene predicted gene 4907
Gm4985 X 23957702 to 23958934 1232 - protein coding gene predicted gene 4985
Gm25299 X 23982185 to 23982286 101 + miRNA gene predicted gene, 25299
Tssr160719 X 24008460 to 24008505 45 + TSS region transcription start site region 160719
Tssr160720 X 24008645 to 24008696 51 + TSS region transcription start site region 160720
Tssr160721 X 24008706 to 24008717 11 + TSS region transcription start site region 160721
Gm4732 X 24242173 to 24264917 22744 - pseudogene predicted gene 4732
Gm9440 X 24319797 to 24335259 15462 + pseudogene predicted gene 9440
Gm6956 X 24407179 to 24418902 11723 - pseudogene predicted gene 6956
Gm27192 X 24422751 to 24424779 2028 - lincRNA gene predicted gene 27192
Gm5934 X 24474308 to 24499163 24855 - protein coding gene predicted gene 5934
Gm4297 X 24552250 to 24573305 21055 - protein coding gene predicted gene 4297
Gm41894 X 24597569 to 24599023 1454 + lncRNA gene predicted gene, 41894
Gm27910 X 24617011 to 24617117 106 - miRNA gene predicted gene, 27910
Gm27839 X 24617213 to 24617318 105 - miRNA gene predicted gene, 27839