Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:21371632-23552394

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50 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr5602 X 21475312 to 21475320 8 + TSS region transcription start site region 5602
Tssr160705 X 21484532 to 21484547 15 + TSS region transcription start site region 160705
Agtr2 X 21484549 to 21488833 4284 + protein coding gene angiotensin II receptor, type 2
Tssr160706 X 21484561 to 21484573 12 + TSS region transcription start site region 160706
Tssr160707 X 21484607 to 21484638 31 + TSS region transcription start site region 160707
Tssr160708 X 21487309 to 21487335 26 + TSS region transcription start site region 160708
Gm22592 X 21500366 to 21500496 130 - snoRNA gene predicted gene, 22592
Gm9439 X 21504054 to 21505466 1412 + pseudogene predicted gene 9439
Gm14558 X 21618130 to 21618510 380 - pseudogene predicted gene 14558
Tssr163113 X 21680576 to 21680584 8 - TSS region transcription start site region 163113
Slc6a14 X 21714900 to 21742358 27458 + protein coding gene solute carrier family 6 (neurotransmitter transporter), member 14
Tssr163114 X 21714902 to 21714938 36 - TSS region transcription start site region 163114
Tssr160709 X 21715034 to 21715053 19 + TSS region transcription start site region 160709
Tssr160710 X 21715077 to 21715092 15 + TSS region transcription start site region 160710
Tssr160711 X 21715094 to 21715103 9 + TSS region transcription start site region 160711
Gm25553 X 21716017 to 21716095 78 + rRNA gene predicted gene, 25553
Gm28269 X 21743440 to 21745097 1657 - protein coding gene predicted gene 28269
Tssr163115 X 21745106 to 21745114 8 - TSS region transcription start site region 163115
Gm28268 X 21751379 to 21761733 10354 + lincRNA gene predicted gene 28268
Gm24535 X 21901732 to 21901838 106 - snRNA gene predicted gene, 24535
Gm14563 X 22205170 to 22205523 353 - pseudogene predicted gene 14563
Gm14561 X 22226375 to 22228343 1968 - pseudogene predicted gene 14561
Gm6071 X 22305800 to 22306274 474 - pseudogene predicted gene 6071
Gm25812 X 22434414 to 22434516 102 + snRNA gene predicted gene, 25812
Gm14562 X 22438876 to 22439418 542 - pseudogene predicted gene 14562
Gm15030 X 22446056 to 22446539 483 + pseudogene predicted gene 15030
DXMit125 X 22456250 to 22456375 125 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 125
Tssr160712 X 22461630 to 22461641 11 + TSS region transcription start site region 160712
Ppp1r2-ps7 X 22461632 to 22462394 762 + pseudogene protein phosphatase 1, regulatory (inhibitor) subunit 2, pseudogene 7
Tssr160713 X 22461650 to 22461652 2 + TSS region transcription start site region 160713
4930554N03Rik X 22638327 to 22686846 48519 unclassified gene RIKEN cDNA 4930554N03 gene
DXMit90 X 22658318 to 22658418 100 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 90
DXMit188 X 22754150 to 22754254 104 DNA segment DNA Segment, Chr X, Massachusetts Institute of Technology 188
Gm26131 X 22861936 to 22862045 109 + snRNA gene predicted gene, 26131
Tssr160714 X 23115592 to 23115595 3 + TSS region transcription start site region 160714
Klhl13 X 23219271 to 23365082 145811 - protein coding gene kelch-like 13
Tssr5603 X 23232403 to 23232408 5 + TSS region transcription start site region 5603
Tssr163116 X 23266751 to 23266806 55 - TSS region transcription start site region 163116
Tssr163117 X 23284603 to 23284618 15 - TSS region transcription start site region 163117
Tssr163118 X 23285445 to 23285454 9 - TSS region transcription start site region 163118
Tssr163119 X 23285532 to 23285578 46 - TSS region transcription start site region 163119
Tssr163120 X 23296067 to 23296109 42 - TSS region transcription start site region 163120
Tssr163121 X 23296397 to 23296417 20 - TSS region transcription start site region 163121
Tssr163122 X 23318896 to 23318909 13 - TSS region transcription start site region 163122
Tssr163123 X 23361687 to 23361702 15 - TSS region transcription start site region 163123
Gm14523 X 23364506 to 23365063 557 - pseudogene predicted gene 14523
Cpgi22655 X 23364612 to 23365161 549 CpG island CpG island 22655
Tssr163124 X 23365008 to 23365043 35 - TSS region transcription start site region 163124
Tssr163125 X 23365044 to 23365090 46 - TSS region transcription start site region 163125
Gm7164 X 23399030 to 23399479 449 - pseudogene predicted gene 7164