Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:21062210-21584727

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Zfp182 X 21028939 to 21062316 33377 - protein coding gene zinc finger protein 182
Tssr160699 X 21068427 to 21068433 6 + TSS region transcription start site region 160699
Tssr160700 X 21068435 to 21068447 12 + TSS region transcription start site region 160700
Spaca5 X 21068488 to 21077959 9471 + protein coding gene sperm acrosome associated 5
Zfp300 X 21079174 to 21089527 10353 - protein coding gene zinc finger protein 300
Tssr163110 X 21089130 to 21089136 6 - TSS region transcription start site region 163110
Ssxa1 X 21118414 to 21122088 3674 + protein coding gene synovial sarcoma, X member A1
Tssr160701 X 21146684 to 21146689 5 + TSS region transcription start site region 160701
Gm1848 X 21146844 to 21147640 796 + pseudogene predicted gene 1848
Gm5932 X 21169950 to 21179036 9086 - protein coding gene predicted gene 5932
Gm21876 X 21174439 to 21175653 1214 - protein coding gene predicted gene, 21876
Tssr163111 X 21179026 to 21179040 14 - TSS region transcription start site region 163111
4930453H23Rik X 21206580 to 21221665 15085 - lincRNA gene RIKEN cDNA 4930453H23 gene
Tssr163112 X 21221653 to 21221666 13 - TSS region transcription start site region 163112
Gm6938 X 21312210 to 21334727 22517 - lincRNA gene predicted gene 6938
Cpgi22654 X 21360792 to 21361091 299 CpG island CpG island 22654
Tssr160702 X 21360834 to 21360851 17 + TSS region transcription start site region 160702
Tssr160703 X 21360856 to 21360899 43 + TSS region transcription start site region 160703
Gm5124 X 21360865 to 21364622 3757 + pseudogene predicted pseudogene 5124
Gm26593 X 21360865 to 21364622 3757 - lincRNA gene predicted gene, 26593
Tssr160704 X 21360904 to 21360930 26 + TSS region transcription start site region 160704
Tssr5602 X 21475312 to 21475320 8 + TSS region transcription start site region 5602
Tssr160705 X 21484532 to 21484547 15 + TSS region transcription start site region 160705
Agtr2 X 21484549 to 21488833 4284 + protein coding gene angiotensin II receptor, type 2
Tssr160706 X 21484561 to 21484573 12 + TSS region transcription start site region 160706
Tssr160707 X 21484607 to 21484638 31 + TSS region transcription start site region 160707
Tssr160708 X 21487309 to 21487335 26 + TSS region transcription start site region 160708
Gm22592 X 21500366 to 21500496 130 - snoRNA gene predicted gene, 22592
Gm9439 X 21504054 to 21505466 1412 + pseudogene predicted gene 9439