MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region X:20961981-21162062

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Uxt	X	20951665 to 20962034	10369	-	protein coding gene	ubiquitously expressed prefoldin like chaperone
Cpgi22652	X	20961579 to 20962217	638		CpG island	CpG island 22652
A230072C01Rik	X	20961684 to 20986737	25053	+	lncRNA gene	RIKEN cDNA A230072C01 gene
Tssr163106	X	20961968 to 20961987	19	-	TSS region	transcription start site region 163106
Tssr163107	X	20962005 to 20962025	20	-	TSS region	transcription start site region 163107
Tssr160698	X	20962095 to 20962135	40	+	TSS region	transcription start site region 160698
Zfp182	X	21028939 to 21062316	33377	-	protein coding gene	zinc finger protein 182
Tssr163108	X	21058218 to 21058225	7	-	TSS region	transcription start site region 163108
Cpgi22653	X	21061976 to 21062168	192		CpG island	CpG island 22653
Tssr163109	X	21061981 to 21062062	81	-	TSS region	transcription start site region 163109
Tssr160699	X	21068427 to 21068433	6	+	TSS region	transcription start site region 160699
Tssr160700	X	21068435 to 21068447	12	+	TSS region	transcription start site region 160700
Spaca5	X	21068488 to 21077959	9471	+	protein coding gene	sperm acrosome associated 5
Zfp300	X	21079174 to 21089527	10353	-	protein coding gene	zinc finger protein 300
Tssr163110	X	21089130 to 21089136	6	-	TSS region	transcription start site region 163110
Ssxa1	X	21118414 to 21122088	3674	+	protein coding gene	synovial sarcoma, X member A1
Tssr160701	X	21146684 to 21146689	5	+	TSS region	transcription start site region 160701
Gm1848	X	21146844 to 21147640	796	+	pseudogene	predicted gene 1848