Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:20552448-20682471

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rgn X 20549787 to 20562089 12302 + protein coding gene regucalcin
Tssr160649 X 20557559 to 20557568 9 + TSS region transcription start site region 160649
Tssr5600 X 20559430 to 20559441 11 - TSS region transcription start site region 5600
Gm14539 X 20581141 to 20581314 173 - pseudogene predicted gene 14539
Tssr163070 X 20581334 to 20581371 37 - TSS region transcription start site region 163070
Gm23628 X 20614523 to 20614695 172 - snRNA gene predicted gene, 23628
Ndufb11 X 20615326 to 20617564 2238 - protein coding gene NADH:ubiquinone oxidoreductase subunit B11
Cpgi22645 X 20617003 to 20617435 432 CpG island CpG island 22645
Tssr163071 X 20617262 to 20617289 27 - TSS region transcription start site region 163071
Tssr163072 X 20617448 to 20617471 23 - TSS region transcription start site region 163072
Rbm10 X 20617503 to 20650901 33398 + protein coding gene RNA binding motif protein 10
Tssr163073 X 20617574 to 20617618 44 - TSS region transcription start site region 163073
Tssr160650 X 20617757 to 20617816 59 + TSS region transcription start site region 160650
Cpgi22646 X 20617795 to 20618301 506 CpG island CpG island 22646
Tssr163074 X 20618196 to 20618218 22 - TSS region transcription start site region 163074
Tssr160651 X 20641882 to 20641919 37 + TSS region transcription start site region 160651
Uba1 X 20658326 to 20683179 24853 + protein coding gene ubiquitin-like modifier activating enzyme 1
Tssr160652 X 20658389 to 20658402 13 + TSS region transcription start site region 160652
Tssr160653 X 20658413 to 20658447 34 + TSS region transcription start site region 160653
Tssr160654 X 20658450 to 20658479 29 + TSS region transcription start site region 160654
Tssr160655 X 20659000 to 20659005 5 + TSS region transcription start site region 160655
Tssr160656 X 20659010 to 20659031 21 + TSS region transcription start site region 160656
Tssr160657 X 20662898 to 20662909 11 + TSS region transcription start site region 160657
Tssr160658 X 20662916 to 20662943 27 + TSS region transcription start site region 160658
Tssr160659 X 20671347 to 20671365 18 + TSS region transcription start site region 160659
Tssr160660 X 20672987 to 20672999 12 + TSS region transcription start site region 160660
Tssr160661 X 20678691 to 20678719 28 + TSS region transcription start site region 160661
Tssr160662 X 20680045 to 20680071 26 + TSS region transcription start site region 160662
Tssr160663 X 20680791 to 20680818 27 + TSS region transcription start site region 160663
Tssr160664 X 20681157 to 20681171 14 + TSS region transcription start site region 160664
Tssr160665 X 20681333 to 20681366 33 + TSS region transcription start site region 160665
Tssr160666 X 20682140 to 20682156 16 + TSS region transcription start site region 160666