Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:19858851-20342137

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19 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rpl36-ps10 X 19870824 to 19871039 215 + pseudogene ribosomal protein L36, pseudogene 10
Gm5384 X 19893657 to 19894119 462 + pseudogene predicted gene 5384
Cpgi22642 X 20059431 to 20061248 1817 CpG island CpG island 22642
Tssr160634 X 20059535 to 20059574 39 + TSS region transcription start site region 160634
Chst7 X 20059560 to 20097521 37961 + protein coding gene carbohydrate (N-acetylglucosamino) sulfotransferase 7
Tssr160635 X 20059581 to 20059592 11 + TSS region transcription start site region 160635
6330509M05Rik X 20098851 to 20102137 3286 unclassified non-coding RNA gene RIKEN cDNA 6330509M05 gene
Slc9a7 X 20105754 to 20291807 186053 - protein coding gene solute carrier family 9 (sodium/hydrogen exchanger), member 7
Tssr163064 X 20146124 to 20146132 8 - TSS region transcription start site region 163064
Tssr163065 X 20146137 to 20146149 12 - TSS region transcription start site region 163065
Tssr163066 X 20171438 to 20171439 1 - TSS region transcription start site region 163066
Tssr5599 X 20239387 to 20239391 4 + TSS region transcription start site region 5599
Gm9083 X 20239469 to 20240287 818 + pseudogene predicted gene 9083
Cpgi22643 X 20291286 to 20292184 898 CpG island CpG island 22643
Tssr163067 X 20291728 to 20291775 47 - TSS region transcription start site region 163067
Tssr163068 X 20291776 to 20291834 58 - TSS region transcription start site region 163068
Tssr163069 X 20307282 to 20307286 4 - TSS region transcription start site region 163069
DXMit164 X 20318055 to 20318173 118 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 164
Gm14529 X 20339299 to 20339704 405 + pseudogene predicted gene 14529