Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:19801124-20491132

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rpl36-ps10 X 19870824 to 19871039 215 + pseudogene ribosomal protein L36, pseudogene 10
Gm5384 X 19893657 to 19894119 462 + pseudogene predicted gene 5384
Cpgi22642 X 20059431 to 20061248 1817 CpG island CpG island 22642
Tssr160634 X 20059535 to 20059574 39 + TSS region transcription start site region 160634
Chst7 X 20059560 to 20097521 37961 + protein coding gene carbohydrate (N-acetylglucosamino) sulfotransferase 7
Tssr160635 X 20059581 to 20059592 11 + TSS region transcription start site region 160635
6330509M05Rik X 20098851 to 20102137 3286 unclassified non-coding RNA gene RIKEN cDNA 6330509M05 gene
Slc9a7 X 20105754 to 20291807 186053 - protein coding gene solute carrier family 9 (sodium/hydrogen exchanger), member 7
Tssr163064 X 20146124 to 20146132 8 - TSS region transcription start site region 163064
Tssr163065 X 20146137 to 20146149 12 - TSS region transcription start site region 163065
Tssr163066 X 20171438 to 20171439 1 - TSS region transcription start site region 163066
Tssr5599 X 20239387 to 20239391 4 + TSS region transcription start site region 5599
Gm9083 X 20239469 to 20240287 818 + pseudogene predicted gene 9083
Cpgi22643 X 20291286 to 20292184 898 CpG island CpG island 22643
Tssr163067 X 20291728 to 20291775 47 - TSS region transcription start site region 163067
Tssr163068 X 20291776 to 20291834 58 - TSS region transcription start site region 163068
Tssr163069 X 20307282 to 20307286 4 - TSS region transcription start site region 163069
DXMit164 X 20318055 to 20318173 118 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 164
Gm14529 X 20339299 to 20339704 405 + pseudogene predicted gene 14529
Rp2 X 20364481 to 20405653 41172 + protein coding gene retinitis pigmentosa 2 homolog
Tssr160636 X 20364555 to 20364616 61 + TSS region transcription start site region 160636
Tssr160637 X 20364641 to 20364666 25 + TSS region transcription start site region 160637
Tssr160638 X 20364672 to 20364683 11 + TSS region transcription start site region 160638
Gm9085 X 20382750 to 20383821 1071 - pseudogene predicted gene 9085
Tssr160639 X 20385166 to 20385182 16 + TSS region transcription start site region 160639
Gm14537 X 20391710 to 20392239 529 + pseudogene predicted gene 14537
Cpgi22644 X 20425159 to 20426471 1312 CpG island CpG island 22644
Tssr160640 X 20425359 to 20425378 19 + TSS region transcription start site region 160640
Jade3 X 20425688 to 20519939 94251 + protein coding gene jade family PHD finger 3
Tssr160641 X 20425743 to 20425762 19 + TSS region transcription start site region 160641
Tssr160642 X 20425780 to 20425794 14 + TSS region transcription start site region 160642
Gm14884 X 20459490 to 20459685 195 - pseudogene predicted gene 14884
Tssr160643 X 20483466 to 20483467 1 + TSS region transcription start site region 160643