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Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:19191653-20262031

Filter by:
29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr163059 X 19202576 to 19202617 41 - TSS region transcription start site region 163059
Tssr160633 X 19202874 to 19202905 31 + TSS region transcription start site region 160633
Tssr163060 X 19206372 to 19206392 20 - TSS region transcription start site region 163060
Tssr163061 X 19219147 to 19219152 5 - TSS region transcription start site region 163061
Gm26652 X 19224789 to 19237856 13067 - lincRNA gene predicted gene, 26652
Tssr163062 X 19236026 to 19236035 9 - TSS region transcription start site region 163062
Gm41892 X 19236085 to 19242458 6373 + lncRNA gene predicted gene, 41892
Cpgi22641 X 19237366 to 19238135 769 CpG island CpG island 22641
Tssr163063 X 19237841 to 19237860 19 - TSS region transcription start site region 163063
Gm22783 X 19355001 to 19355107 106 + snRNA gene predicted gene, 22783
Gm14885 X 19386291 to 19386786 495 - pseudogene predicted gene 14885
Tex13c3 X 19479424 to 19481319 1895 - protein coding gene TEX13 family member C3
Tssr5598 X 19704020 to 19704023 3 + TSS region transcription start site region 5598
Gm14531 X 19726653 to 19727031 378 + pseudogene predicted gene 14531
Gm23678 X 19762668 to 19762774 106 - snRNA gene predicted gene, 23678
Gm14530 X 19762933 to 19763265 332 - pseudogene predicted gene 14530
Rpl36-ps10 X 19870824 to 19871039 215 + pseudogene ribosomal protein L36, pseudogene 10
Gm5384 X 19893657 to 19894119 462 + pseudogene predicted gene 5384
Cpgi22642 X 20059431 to 20061248 1817 CpG island CpG island 22642
Tssr160634 X 20059535 to 20059574 39 + TSS region transcription start site region 160634
Chst7 X 20059560 to 20097521 37961 + protein coding gene carbohydrate (N-acetylglucosamino) sulfotransferase 7
Tssr160635 X 20059581 to 20059592 11 + TSS region transcription start site region 160635
6330509M05Rik X 20098851 to 20102137 3286 unclassified non-coding RNA gene RIKEN cDNA 6330509M05 gene
Slc9a7 X 20105754 to 20291807 186053 - protein coding gene solute carrier family 9 (sodium/hydrogen exchanger), member 7
Tssr163064 X 20146124 to 20146132 8 - TSS region transcription start site region 163064
Tssr163065 X 20146137 to 20146149 12 - TSS region transcription start site region 163065
Tssr163066 X 20171438 to 20171439 1 - TSS region transcription start site region 163066
Tssr5599 X 20239387 to 20239391 4 + TSS region transcription start site region 5599
Gm9083 X 20239469 to 20240287 818 + pseudogene predicted gene 9083