Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:17279430-18071284

Filter by:
21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Efhc2 X 17132049 to 17319368 187319 - protein coding gene EF-hand domain (C-terminal) containing 2
Gm35105 X 17251541 to 17454628 203087 + lncRNA gene predicted gene, 35105
Tssr163030 X 17319316 to 17319334 18 - TSS region transcription start site region 163030
Tssr163031 X 17319365 to 17319400 35 - TSS region transcription start site region 163031
Cpgi22638 X 17319380 to 17319583 203 CpG island CpG island 22638
Gm22294 X 17325315 to 17325418 103 + snRNA gene predicted gene, 22294
Gm39497 X 17393298 to 17516990 123692 - lncRNA gene predicted gene, 39497
Cpgi22639 X 17513528 to 17513706 178 CpG island CpG island 22639
Fundc1 X 17556564 to 17572325 15761 - protein coding gene FUN14 domain containing 1
Tssr163032 X 17571563 to 17571595 32 - TSS region transcription start site region 163032
Tssr163033 X 17572177 to 17572213 36 - TSS region transcription start site region 163033
Tssr163034 X 17572217 to 17572228 11 - TSS region transcription start site region 163034
Tssr163035 X 17572241 to 17572279 38 - TSS region transcription start site region 163035
Tssr163036 X 17572282 to 17572296 14 - TSS region transcription start site region 163036
Tssr160620 X 17609654 to 17609689 35 + TSS region transcription start site region 160620
Gm5073 X 17626257 to 17627076 819 + pseudogene predicted pseudogene 5073
Gm9436 X 17674430 to 17676284 1854 - pseudogene predicted gene 9436
Tssr160621 X 17725443 to 17725462 19 + TSS region transcription start site region 160621
Gm39498 X 17776754 to 17809103 32349 - lncRNA gene predicted gene, 39498
Gm5755 X 17880670 to 17881506 836 - pseudogene predicted pseudogene 5755
Gm5123 X 17912982 to 17913818 836 - pseudogene predicted pseudogene 5123