Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:169085273-169555383

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Arhgap6 X 168795099 to 169304435 509336 + protein coding gene Rho GTPase activating protein 6
Gm15261 X 169037674 to 169106536 68862 - antisense lncRNA gene predicted gene 15261
Tssr162710 X 169091652 to 169091663 11 + TSS region transcription start site region 162710
Tssr162711 X 169097805 to 169097816 11 + TSS region transcription start site region 162711
Tssr162712 X 169099152 to 169099166 14 + TSS region transcription start site region 162712
Tssr162713 X 169106659 to 169106709 50 + TSS region transcription start site region 162713
Tssr162714 X 169122292 to 169122307 15 + TSS region transcription start site region 162714
Tssr162715 X 169122318 to 169122336 18 + TSS region transcription start site region 162715
Tssr162716 X 169150262 to 169150275 13 + TSS region transcription start site region 162716
Amelx X 169176114 to 169187200 11086 - protein coding gene amelogenin, X-linked
Tssr164634 X 169182525 to 169182526 1 - TSS region transcription start site region 164634
Tssr164635 X 169187205 to 169187210 5 - TSS region transcription start site region 164635
Tssr162717 X 169220277 to 169220290 13 + TSS region transcription start site region 162717
Tssr162718 X 169258665 to 169258668 3 + TSS region transcription start site region 162718
Tssr162719 X 169267589 to 169267594 5 + TSS region transcription start site region 162719
Gm27980 X 169295009 to 169295177 168 + unclassified non-coding RNA gene predicted gene, 27980
Tssr162720 X 169302990 to 169303003 13 + TSS region transcription start site region 162720
Tssr162721 X 169303516 to 169303521 5 + TSS region transcription start site region 162721
Hccs X 169311530 to 169320371 8841 - protein coding gene holocytochrome c synthetase
Cpgi23059 X 169319797 to 169320930 1133 CpG island CpG island 23059
Tssr164636 X 169320118 to 169320133 15 - TSS region transcription start site region 164636
Tssr164637 X 169320273 to 169320383 110 - TSS region transcription start site region 164637
Tssr162722 X 169320382 to 169320420 38 + TSS region transcription start site region 162722
Tssr162723 X 169320609 to 169320634 25 + TSS region transcription start site region 162723
Gm15246 X 169320622 to 169368190 47568 + unclassified non-coding RNA gene predicted gene 15246
Tssr162724 X 169320646 to 169320657 11 + TSS region transcription start site region 162724
DXUsc1 X 169323832 to 169324154 322 DNA segment DNA segment, Chr X, University of Southern California 1
BC022960 X 169368189 to 169370003 1814 + pseudogene cDNA sequence BC022960
Gm15245 X 169447830 to 169475913 28083 + lincRNA gene predicted gene 15245