Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:168293805-169053816

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34 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Frmpd4 X 167471309 to 168577231 1105922 - protein coding gene FERM and PDZ domain containing 4
Tssr164627 X 168349230 to 168349256 26 - TSS region transcription start site region 164627
DXMit71 X 168353326 to 168353444 118 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 71
DXMit71.1 X 168353525 to 168353647 122 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 71.1
Gm8832 X 168366464 to 168366858 394 + pseudogene predicted gene 8832
DXMit30 X 168412387 to 168412505 118 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 30
Tssr164628 X 168419658 to 168419663 5 - TSS region transcription start site region 164628
Gm7209 X 168546009 to 168546341 332 + pseudogene predicted pseudogene 7209
Gm23197 X 168581891 to 168582002 111 - snRNA gene predicted gene, 23197
Gm39550 X 168623830 to 168624815 985 - lncRNA gene predicted gene, 39550
Msl3 X 168654117 to 168673898 19781 - protein coding gene MSL complex subunit 3
Tssr164629 X 168672482 to 168672507 25 - TSS region transcription start site region 164629
Tssr164630 X 168672528 to 168672564 36 - TSS region transcription start site region 164630
Cpgi23055 X 168673259 to 168674515 1256 CpG island CpG island 23055
Tssr164631 X 168673805 to 168673816 11 - TSS region transcription start site region 164631
Tssr164632 X 168673828 to 168673896 68 - TSS region transcription start site region 164632
Tssr164633 X 168674349 to 168674361 12 - TSS region transcription start site region 164633
Gm15233 X 168774857 to 168775256 399 - pseudogene predicted gene 15233
Arhgap6 X 168795099 to 169304435 509336 + protein coding gene Rho GTPase activating protein 6
Cpgi23056 X 168795362 to 168795752 390 CpG island CpG island 23056
Cpgi23057 X 168796034 to 168796808 774 CpG island CpG island 23057
Tssr162695 X 168869022 to 168869027 5 + TSS region transcription start site region 162695
Tssr162696 X 168874761 to 168874770 9 + TSS region transcription start site region 162696
DXMit100 X 168936280 to 168936422 142 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 100
Tssr162697 X 168997526 to 168997531 5 + TSS region transcription start site region 162697
Cpgi23058 X 169036557 to 169036874 317 CpG island CpG island 23058
Tssr162698 X 169036610 to 169036672 62 + TSS region transcription start site region 162698
Tssr162699 X 169036673 to 169036704 31 + TSS region transcription start site region 162699
Tssr162700 X 169037672 to 169037677 5 + TSS region transcription start site region 162700
Gm15261 X 169037674 to 169106536 68862 - antisense lncRNA gene predicted gene 15261
Tssr162701 X 169048387 to 169048412 25 + TSS region transcription start site region 162701
Tssr162702 X 169048948 to 169048965 17 + TSS region transcription start site region 162702
Tssr162703 X 169052859 to 169052887 28 + TSS region transcription start site region 162703
Tssr162704 X 169052890 to 169052903 13 + TSS region transcription start site region 162704