Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:167349230-169349256

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88 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Prps2 X 167346322 to 167382749 36427 - protein coding gene phosphoribosyl pyrophosphate synthetase 2
Tssr164614 X 167351776 to 167351783 7 - TSS region transcription start site region 164614
Gm15239 X 167361455 to 167364421 2966 + antisense lncRNA gene predicted gene 15239
Gm26368 X 167364180 to 167364297 117 - snoRNA gene predicted gene, 26368
Cpgi23053 X 167381747 to 167382709 962 CpG island CpG island 23053
Tssr164615 X 167382672 to 167382738 66 - TSS region transcription start site region 164615
Tssr164616 X 167382747 to 167382760 13 - TSS region transcription start site region 164616
Gm6744 X 167445989 to 167446531 542 - pseudogene predicted gene 6744
Tssr164617 X 167446549 to 167446567 18 - TSS region transcription start site region 164617
Tssr164618 X 167446571 to 167446587 16 - TSS region transcription start site region 164618
Frmpd4 X 167471309 to 168577231 1105922 - protein coding gene FERM and PDZ domain containing 4
Gm15238 X 167776261 to 167777556 1295 + pseudogene predicted gene 15238
Tssr164619 X 167855061 to 167855081 20 - TSS region transcription start site region 164619
Gm24772 X 167902315 to 167902424 109 + rRNA gene predicted gene, 24772
DXMit29 X 167906434 to 167906583 149 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 29
Tssr164620 X 167966635 to 167966638 3 - TSS region transcription start site region 164620
Gm15240 X 167987520 to 167988224 704 + pseudogene predicted gene 15240
Tssr164621 X 168051287 to 168051290 3 - TSS region transcription start site region 164621
Gm15237 X 168074454 to 168074922 468 + pseudogene predicted gene 15237
Tssr164622 X 168122912 to 168122954 42 - TSS region transcription start site region 164622
Cpgi23054 X 168123025 to 168123547 522 CpG island CpG island 23054
Tssr164623 X 168123256 to 168123267 11 - TSS region transcription start site region 164623
Tssr164624 X 168123311 to 168123334 23 - TSS region transcription start site region 164624
Tssr164625 X 168124317 to 168124340 23 - TSS region transcription start site region 164625
Tssr164626 X 168124344 to 168124375 31 - TSS region transcription start site region 164626
Tssr164627 X 168349230 to 168349256 26 - TSS region transcription start site region 164627
DXMit71 X 168353326 to 168353444 118 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 71
DXMit71.1 X 168353525 to 168353647 122 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 71.1
Gm8832 X 168366464 to 168366858 394 + pseudogene predicted gene 8832
DXMit30 X 168412387 to 168412505 118 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 30
Tssr164628 X 168419658 to 168419663 5 - TSS region transcription start site region 164628
Gm7209 X 168546009 to 168546341 332 + pseudogene predicted pseudogene 7209
Gm23197 X 168581891 to 168582002 111 - snRNA gene predicted gene, 23197
Gm39550 X 168623830 to 168624815 985 - lncRNA gene predicted gene, 39550
Msl3 X 168654117 to 168673898 19781 - protein coding gene MSL complex subunit 3
Tssr164629 X 168672482 to 168672507 25 - TSS region transcription start site region 164629
Tssr164630 X 168672528 to 168672564 36 - TSS region transcription start site region 164630
Cpgi23055 X 168673259 to 168674515 1256 CpG island CpG island 23055
Tssr164631 X 168673805 to 168673816 11 - TSS region transcription start site region 164631
Tssr164632 X 168673828 to 168673896 68 - TSS region transcription start site region 164632
Tssr164633 X 168674349 to 168674361 12 - TSS region transcription start site region 164633
Gm15233 X 168774857 to 168775256 399 - pseudogene predicted gene 15233
Arhgap6 X 168795099 to 169304435 509336 + protein coding gene Rho GTPase activating protein 6
Cpgi23056 X 168795362 to 168795752 390 CpG island CpG island 23056
Cpgi23057 X 168796034 to 168796808 774 CpG island CpG island 23057
Tssr162695 X 168869022 to 168869027 5 + TSS region transcription start site region 162695
Tssr162696 X 168874761 to 168874770 9 + TSS region transcription start site region 162696
DXMit100 X 168936280 to 168936422 142 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 100
Tssr162697 X 168997526 to 168997531 5 + TSS region transcription start site region 162697
Cpgi23058 X 169036557 to 169036874 317 CpG island CpG island 23058
Tssr162698 X 169036610 to 169036672 62 + TSS region transcription start site region 162698
Tssr162699 X 169036673 to 169036704 31 + TSS region transcription start site region 162699
Tssr162700 X 169037672 to 169037677 5 + TSS region transcription start site region 162700
Gm15261 X 169037674 to 169106536 68862 - antisense lncRNA gene predicted gene 15261
Tssr162701 X 169048387 to 169048412 25 + TSS region transcription start site region 162701
Tssr162702 X 169048948 to 169048965 17 + TSS region transcription start site region 162702
Tssr162703 X 169052859 to 169052887 28 + TSS region transcription start site region 162703
Tssr162704 X 169052890 to 169052903 13 + TSS region transcription start site region 162704
Tssr162705 X 169058800 to 169058812 12 + TSS region transcription start site region 162705
Tssr162706 X 169076771 to 169076793 22 + TSS region transcription start site region 162706
Tssr162707 X 169082522 to 169082538 16 + TSS region transcription start site region 162707
Tssr162708 X 169082607 to 169082646 39 + TSS region transcription start site region 162708
Tssr162709 X 169082740 to 169082758 18 + TSS region transcription start site region 162709
Tssr162710 X 169091652 to 169091663 11 + TSS region transcription start site region 162710
Tssr162711 X 169097805 to 169097816 11 + TSS region transcription start site region 162711
Tssr162712 X 169099152 to 169099166 14 + TSS region transcription start site region 162712
Tssr162713 X 169106659 to 169106709 50 + TSS region transcription start site region 162713
Tssr162714 X 169122292 to 169122307 15 + TSS region transcription start site region 162714
Tssr162715 X 169122318 to 169122336 18 + TSS region transcription start site region 162715
Tssr162716 X 169150262 to 169150275 13 + TSS region transcription start site region 162716
Amelx X 169176114 to 169187200 11086 - protein coding gene amelogenin, X-linked
Tssr164634 X 169182525 to 169182526 1 - TSS region transcription start site region 164634
Tssr164635 X 169187205 to 169187210 5 - TSS region transcription start site region 164635
Tssr162717 X 169220277 to 169220290 13 + TSS region transcription start site region 162717
Tssr162718 X 169258665 to 169258668 3 + TSS region transcription start site region 162718
Tssr162719 X 169267589 to 169267594 5 + TSS region transcription start site region 162719
Gm27980 X 169295009 to 169295177 168 + unclassified non-coding RNA gene predicted gene, 27980
Tssr162720 X 169302990 to 169303003 13 + TSS region transcription start site region 162720
Tssr162721 X 169303516 to 169303521 5 + TSS region transcription start site region 162721
Hccs X 169311530 to 169320371 8841 - protein coding gene holocytochrome c synthetase
Cpgi23059 X 169319797 to 169320930 1133 CpG island CpG island 23059
Tssr164636 X 169320118 to 169320133 15 - TSS region transcription start site region 164636
Tssr164637 X 169320273 to 169320383 110 - TSS region transcription start site region 164637
Tssr162722 X 169320382 to 169320420 38 + TSS region transcription start site region 162722
Tssr162723 X 169320609 to 169320634 25 + TSS region transcription start site region 162723
Gm15246 X 169320622 to 169368190 47568 + unclassified non-coding RNA gene predicted gene 15246
Tssr162724 X 169320646 to 169320657 11 + TSS region transcription start site region 162724
DXUsc1 X 169323832 to 169324154 322 DNA segment DNA segment, Chr X, University of Southern California 1