Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:167286287-168816290

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60 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
DXMit223 X 167303583 to 167303683 100 DNA segment DNA Segment, Chr X Massachusetts Institute of Technology 223
Tssr164602 X 167304771 to 167304780 9 - TSS region transcription start site region 164602
Tssr164603 X 167304810 to 167304821 11 - TSS region transcription start site region 164603
Tlr7 X 167304929 to 167330558 25629 - protein coding gene toll-like receptor 7
Tssr164604 X 167307346 to 167307354 8 - TSS region transcription start site region 164604
Tssr164605 X 167307811 to 167307844 33 - TSS region transcription start site region 164605
Tssr164606 X 167307941 to 167307954 13 - TSS region transcription start site region 164606
Tssr164607 X 167308013 to 167308030 17 - TSS region transcription start site region 164607
Tssr164608 X 167308157 to 167308173 16 - TSS region transcription start site region 164608
Tssr164609 X 167308296 to 167308309 13 - TSS region transcription start site region 164609
Tssr164610 X 167328612 to 167328623 11 - TSS region transcription start site region 164610
Tssr164611 X 167330481 to 167330503 22 - TSS region transcription start site region 164611
Tssr164612 X 167330509 to 167330579 70 - TSS region transcription start site region 164612
Tssr5720 X 167330588 to 167330609 21 - TSS region transcription start site region 5720
Tssr164613 X 167333057 to 167333065 8 - TSS region transcription start site region 164613
Prps2 X 167346322 to 167382749 36427 - protein coding gene phosphoribosyl pyrophosphate synthetase 2
Tssr164614 X 167351776 to 167351783 7 - TSS region transcription start site region 164614
Gm15239 X 167361455 to 167364421 2966 + antisense lncRNA gene predicted gene 15239
Gm26368 X 167364180 to 167364297 117 - snoRNA gene predicted gene, 26368
Cpgi23053 X 167381747 to 167382709 962 CpG island CpG island 23053
Tssr164615 X 167382672 to 167382738 66 - TSS region transcription start site region 164615
Tssr164616 X 167382747 to 167382760 13 - TSS region transcription start site region 164616
Gm6744 X 167445989 to 167446531 542 - pseudogene predicted gene 6744
Tssr164617 X 167446549 to 167446567 18 - TSS region transcription start site region 164617
Tssr164618 X 167446571 to 167446587 16 - TSS region transcription start site region 164618
Frmpd4 X 167471309 to 168577231 1105922 - protein coding gene FERM and PDZ domain containing 4
Gm15238 X 167776261 to 167777556 1295 + pseudogene predicted gene 15238
Tssr164619 X 167855061 to 167855081 20 - TSS region transcription start site region 164619
Gm24772 X 167902315 to 167902424 109 + rRNA gene predicted gene, 24772
DXMit29 X 167906434 to 167906583 149 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 29
Tssr164620 X 167966635 to 167966638 3 - TSS region transcription start site region 164620
Gm15240 X 167987520 to 167988224 704 + pseudogene predicted gene 15240
Tssr164621 X 168051287 to 168051290 3 - TSS region transcription start site region 164621
Gm15237 X 168074454 to 168074922 468 + pseudogene predicted gene 15237
Tssr164622 X 168122912 to 168122954 42 - TSS region transcription start site region 164622
Cpgi23054 X 168123025 to 168123547 522 CpG island CpG island 23054
Tssr164623 X 168123256 to 168123267 11 - TSS region transcription start site region 164623
Tssr164624 X 168123311 to 168123334 23 - TSS region transcription start site region 164624
Tssr164625 X 168124317 to 168124340 23 - TSS region transcription start site region 164625
Tssr164626 X 168124344 to 168124375 31 - TSS region transcription start site region 164626
Tssr164627 X 168349230 to 168349256 26 - TSS region transcription start site region 164627
DXMit71 X 168353326 to 168353444 118 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 71
DXMit71.1 X 168353525 to 168353647 122 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 71.1
Gm8832 X 168366464 to 168366858 394 + pseudogene predicted gene 8832
DXMit30 X 168412387 to 168412505 118 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 30
Tssr164628 X 168419658 to 168419663 5 - TSS region transcription start site region 164628
Gm7209 X 168546009 to 168546341 332 + pseudogene predicted pseudogene 7209
Gm23197 X 168581891 to 168582002 111 - snRNA gene predicted gene, 23197
Gm39550 X 168623830 to 168624815 985 - lncRNA gene predicted gene, 39550
Msl3 X 168654117 to 168673898 19781 - protein coding gene MSL complex subunit 3
Tssr164629 X 168672482 to 168672507 25 - TSS region transcription start site region 164629
Tssr164630 X 168672528 to 168672564 36 - TSS region transcription start site region 164630
Cpgi23055 X 168673259 to 168674515 1256 CpG island CpG island 23055
Tssr164631 X 168673805 to 168673816 11 - TSS region transcription start site region 164631
Tssr164632 X 168673828 to 168673896 68 - TSS region transcription start site region 164632
Tssr164633 X 168674349 to 168674361 12 - TSS region transcription start site region 164633
Gm15233 X 168774857 to 168775256 399 - pseudogene predicted gene 15233
Arhgap6 X 168795099 to 169304435 509336 + protein coding gene Rho GTPase activating protein 6
Cpgi23056 X 168795362 to 168795752 390 CpG island CpG island 23056
Cpgi23057 X 168796034 to 168796808 774 CpG island CpG island 23057