Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:166420614-166750625

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Bw3 X 134639291 to 166515599 31876308 QTL body weight QTL 3
Ofd1 X 166390033 to 166440704 50671 - protein coding gene OFD1, centriole and centriolar satellite protein
Cpgi23049 X 166440296 to 166441131 835 CpG island CpG island 23049
Tssr164547 X 166440642 to 166440670 28 - TSS region transcription start site region 164547
Tssr164548 X 166440671 to 166440715 44 - TSS region transcription start site region 164548
Trappc2 X 166440736 to 166453140 12404 + protein coding gene trafficking protein particle complex 2
Tssr162683 X 166440738 to 166440781 43 + TSS region transcription start site region 162683
Rab9 X 166457253 to 166479867 22614 - protein coding gene RAB9, member RAS oncogene family
Tssr164549 X 166457872 to 166457901 29 - TSS region transcription start site region 164549
Tssr164550 X 166469839 to 166469851 12 - TSS region transcription start site region 164550
Tssr164551 X 166478628 to 166478653 25 - TSS region transcription start site region 164551
Cpgi23050 X 166479137 to 166479751 614 CpG island CpG island 23050
Tssr164552 X 166479633 to 166479707 74 - TSS region transcription start site region 164552
Gm15229 X 166482265 to 166483602 1337 - pseudogene predicted gene 15229
Tssr164553 X 166483895 to 166483904 9 - TSS region transcription start site region 164553
Tssr164554 X 166483905 to 166483925 20 - TSS region transcription start site region 164554
Gm15223 X 166485602 to 166486427 825 + pseudogene predicted gene 15223
Tssr164555 X 166498857 to 166498873 16 - TSS region transcription start site region 164555
Tssr164556 X 166499007 to 166499020 13 - TSS region transcription start site region 164556
Tceanc X 166499812 to 166518567 18755 - protein coding gene transcription elongation factor A (SII) N-terminal and central domain containing
Tssr162684 X 166510183 to 166510223 40 + TSS region transcription start site region 162684
Cpgi23051 X 166510191 to 166510889 698 CpG island CpG island 23051
Tssr164557 X 166510424 to 166510475 51 - TSS region transcription start site region 164557
DXMit12 X 166515449 to 166515599 150 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 12
Tssr164558 X 166518575 to 166518582 7 - TSS region transcription start site region 164558
Egfl6 X 166523007 to 166585716 62709 - protein coding gene EGF-like-domain, multiple 6
Tssr164559 X 166546509 to 166546514 5 - TSS region transcription start site region 164559
Tssr164560 X 166585593 to 166585605 12 - TSS region transcription start site region 164560
Tssr164561 X 166585614 to 166585625 11 - TSS region transcription start site region 164561
Tssr164562 X 166585640 to 166585653 13 - TSS region transcription start site region 164562
Tssr164563 X 166585679 to 166585737 58 - TSS region transcription start site region 164563
Gm15226 X 166618102 to 166621542 3440 - lincRNA gene predicted gene 15226
Tssr164564 X 166618660 to 166618666 6 - TSS region transcription start site region 164564
Tssr164565 X 166618676 to 166618683 7 - TSS region transcription start site region 164565
Tssr164566 X 166618686 to 166618693 7 - TSS region transcription start site region 164566
Tssr162685 X 166661618 to 166661625 7 + TSS region transcription start site region 162685
Gm1720 X 166662025 to 166689812 27787 + lincRNA gene predicted gene 1720
Tssr162686 X 166663427 to 166663446 19 + TSS region transcription start site region 162686
Tssr162687 X 166674538 to 166674540 2 + TSS region transcription start site region 162687