Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:165985449-167045599

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75 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Bw3 X 134639291 to 166515599 31876308 QTL body weight QTL 3
Gm15224 X 166024033 to 166024420 387 - pseudogene predicted gene 15224
Gm15225 X 166062282 to 166070237 7955 + pseudogene predicted gene 15225
Cpgi23047 X 166170240 to 166170644 404 CpG island CpG island 23047
Tssr162669 X 166170449 to 166170512 63 + TSS region transcription start site region 162669
Gemin8 X 166170454 to 166190512 20058 + protein coding gene gem nuclear organelle associated protein 8
Gm15227 X 166205854 to 166206252 398 + pseudogene predicted gene 15227
Tssr5719 X 166217264 to 166217265 1 + TSS region transcription start site region 5719
Tssr162670 X 166238768 to 166238782 14 + TSS region transcription start site region 162670
Tssr162671 X 166238784 to 166238795 11 + TSS region transcription start site region 162671
Tssr162672 X 166238797 to 166238811 14 + TSS region transcription start site region 162672
Cpgi23048 X 166238816 to 166239509 693 CpG island CpG island 23048
Tssr162673 X 166238901 to 166238914 13 + TSS region transcription start site region 162673
Gpm6b X 166238911 to 166388988 150077 + protein coding gene glycoprotein m6b
Tssr162674 X 166238923 to 166239024 101 + TSS region transcription start site region 162674
Tssr162675 X 166239026 to 166239054 28 + TSS region transcription start site region 162675
DXErtd242e X 166254824 to 166255048 224 DNA segment DNA segment, Chr X, ERATO Doi 242, expressed
Tssr162676 X 166344758 to 166344770 12 + TSS region transcription start site region 162676
Tssr162677 X 166344784 to 166344914 130 + TSS region transcription start site region 162677
Tssr162678 X 166344992 to 166345031 39 + TSS region transcription start site region 162678
Tssr162679 X 166346609 to 166346612 3 + TSS region transcription start site region 162679
Tssr162680 X 166357654 to 166357658 4 + TSS region transcription start site region 162680
Tssr162681 X 166372666 to 166372677 11 + TSS region transcription start site region 162681
Tssr162682 X 166386579 to 166386593 14 + TSS region transcription start site region 162682
Ofd1 X 166390033 to 166440704 50671 - protein coding gene OFD1, centriole and centriolar satellite protein
Cpgi23049 X 166440296 to 166441131 835 CpG island CpG island 23049
Tssr164547 X 166440642 to 166440670 28 - TSS region transcription start site region 164547
Tssr164548 X 166440671 to 166440715 44 - TSS region transcription start site region 164548
Trappc2 X 166440736 to 166453140 12404 + protein coding gene trafficking protein particle complex 2
Tssr162683 X 166440738 to 166440781 43 + TSS region transcription start site region 162683
Rab9 X 166457253 to 166479867 22614 - protein coding gene RAB9, member RAS oncogene family
Tssr164549 X 166457872 to 166457901 29 - TSS region transcription start site region 164549
Tssr164550 X 166469839 to 166469851 12 - TSS region transcription start site region 164550
Tssr164551 X 166478628 to 166478653 25 - TSS region transcription start site region 164551
Cpgi23050 X 166479137 to 166479751 614 CpG island CpG island 23050
Tssr164552 X 166479633 to 166479707 74 - TSS region transcription start site region 164552
Gm15229 X 166482265 to 166483602 1337 - pseudogene predicted gene 15229
Tssr164553 X 166483895 to 166483904 9 - TSS region transcription start site region 164553
Tssr164554 X 166483905 to 166483925 20 - TSS region transcription start site region 164554
Gm15223 X 166485602 to 166486427 825 + pseudogene predicted gene 15223
Tssr164555 X 166498857 to 166498873 16 - TSS region transcription start site region 164555
Tssr164556 X 166499007 to 166499020 13 - TSS region transcription start site region 164556
Tceanc X 166499812 to 166518567 18755 - protein coding gene transcription elongation factor A (SII) N-terminal and central domain containing
Tssr162684 X 166510183 to 166510223 40 + TSS region transcription start site region 162684
Cpgi23051 X 166510191 to 166510889 698 CpG island CpG island 23051
Tssr164557 X 166510424 to 166510475 51 - TSS region transcription start site region 164557
DXMit12 X 166515449 to 166515599 150 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 12
Tssr164558 X 166518575 to 166518582 7 - TSS region transcription start site region 164558
Egfl6 X 166523007 to 166585716 62709 - protein coding gene EGF-like-domain, multiple 6
Tssr164559 X 166546509 to 166546514 5 - TSS region transcription start site region 164559
Tssr164560 X 166585593 to 166585605 12 - TSS region transcription start site region 164560
Tssr164561 X 166585614 to 166585625 11 - TSS region transcription start site region 164561
Tssr164562 X 166585640 to 166585653 13 - TSS region transcription start site region 164562
Tssr164563 X 166585679 to 166585737 58 - TSS region transcription start site region 164563
Gm15226 X 166618102 to 166621542 3440 - lincRNA gene predicted gene 15226
Tssr164564 X 166618660 to 166618666 6 - TSS region transcription start site region 164564
Tssr164565 X 166618676 to 166618683 7 - TSS region transcription start site region 164565
Tssr164566 X 166618686 to 166618693 7 - TSS region transcription start site region 164566
Tssr162685 X 166661618 to 166661625 7 + TSS region transcription start site region 162685
Gm1720 X 166662025 to 166689812 27787 + lincRNA gene predicted gene 1720
Tssr162686 X 166663427 to 166663446 19 + TSS region transcription start site region 162686
Tssr162687 X 166674538 to 166674540 2 + TSS region transcription start site region 162687
Gm36547 X 166802175 to 166824521 22346 - lncRNA gene predicted gene, 36547
Gm36867 X 166839965 to 166841005 1040 - lncRNA gene predicted gene, 36867
Gm36918 X 166841656 to 166852490 10834 - lncRNA gene predicted gene, 36918
Rpl7a-ps11 X 166854211 to 166855011 800 + pseudogene ribosomal protein L7A, pseudogene 11
Gm15230 X 166857669 to 166864449 6780 - lincRNA gene predicted gene 15230
Gm30354 X 166868858 to 166884582 15724 - lncRNA gene predicted gene, 30354
n-TSaga3 X 166909733 to 166909814 81 - tRNA gene nuclear encoded tRNA serine 3 (anticodon AGA)
Gm15231 X 166935469 to 166935915 446 + pseudogene predicted gene 15231
Gm44376 X 166957099 to 166957226 127 + miRNA gene predicted gene, 44376
Tssr164567 X 167007990 to 167008018 28 - TSS region transcription start site region 164567
Gm22368 X 167028889 to 167028997 108 - miRNA gene predicted gene, 22368
Gm8814 X 167028902 to 167029436 534 - pseudogene predicted gene 8814
Tssr164568 X 167029648 to 167029652 4 - TSS region transcription start site region 164568