MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region X:163972326-164112340

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Spha3	X	103012242 to 163975945	60963703		QTL	sperm head anomaly 3
Gm38561	X	163975332 to 163983833	8501	+	lncRNA gene	predicted gene, 38561
DXMit249	X	163975834 to 163975945	111		DNA segment	DNA segment, Chr X, Massachusetts Institute of Technology 249
Car5b	X	163976822 to 164027997	51175	-	protein coding gene	carbonic anhydrase 5b, mitochondrial
Tssr164527	X	164021898 to 164021942	44	-	TSS region	transcription start site region 164527
Tssr164528	X	164027965 to 164027994	29	-	TSS region	transcription start site region 164528
Tssr164529	X	164028000 to 164028029	29	-	TSS region	transcription start site region 164529
Tssr164530	X	164042326 to 164042340	14	-	TSS region	transcription start site region 164530
Siah1b	X	164070705 to 164076493	5788	-	protein coding gene	siah E3 ubiquitin protein ligase 1B
Cpgi23044	X	164075970 to 164076674	704		CpG island	CpG island 23044
Tssr164531	X	164076100 to 164076129	29	-	TSS region	transcription start site region 164531
Tssr5717	X	164076130 to 164076166	36	-	TSS region	transcription start site region 5717
Tssr164532	X	164076446 to 164076462	16	-	TSS region	transcription start site region 164532
Tssr164533	X	164076482 to 164076511	29	-	TSS region	transcription start site region 164533
Cltrn	X	164090187 to 164118859	28672	+	protein coding gene	collectrin, amino acid transport regulator
Tssr162606	X	164090188 to 164090201	13	+	TSS region	transcription start site region 162606
Tssr162607	X	164090236 to 164090249	13	+	TSS region	transcription start site region 162607