Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:16356466-17466478

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm14516 X 16379396 to 16379647 251 - pseudogene predicted gene 14516
Cypt1 X 16522869 to 16523689 820 + protein coding gene cysteine-rich perinuclear theca 1
Tssr160613 X 16522871 to 16522874 3 + TSS region transcription start site region 160613
Gm18109 X 16571194 to 16572212 1018 + pseudogene predicted gene, 18109
Csnk2a1-ps X 16610252 to 16611426 1174 + pseudogene casein kinase 2, alpha 1, pseudogene
Cpgi22637 X 16618271 to 16619059 788 CpG island CpG island 22637
Tssr160614 X 16618563 to 16618576 13 + TSS region transcription start site region 160614
Maoa X 16619698 to 16687812 68114 + protein coding gene monoamine oxidase A
Tssr160615 X 16619755 to 16619758 3 + TSS region transcription start site region 160615
Tssr160616 X 16619809 to 16619818 9 + TSS region transcription start site region 160616
Tssr160617 X 16619824 to 16619842 18 + TSS region transcription start site region 160617
Tssr160618 X 16634586 to 16634591 5 + TSS region transcription start site region 160618
Maob X 16709282 to 16817366 108084 - protein coding gene monoamine oxidase B
DXMit138 X 16756724 to 16756991 267 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 138
Tssr163024 X 16817316 to 16817335 19 - TSS region transcription start site region 163024
Tssr163025 X 16817339 to 16817373 34 - TSS region transcription start site region 163025
Tssr163026 X 16817380 to 16817403 23 - TSS region transcription start site region 163026
Ndp X 16885521 to 16911774 26253 - protein coding gene Norrie disease (pseudoglioma) (human)
DXMit56 X 16910241 to 16910384 143 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 56
Tssr163027 X 16911466 to 16911478 12 - TSS region transcription start site region 163027
Tssr163028 X 16911675 to 16911691 16 - TSS region transcription start site region 163028
DXMit53 X 16963313 to 16963429 116 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 53
Gm4203 X 17111320 to 17115627 4307 - lncRNA gene predicted gene 4203
Efhc2 X 17132049 to 17319368 187319 - protein coding gene EF-hand domain (C-terminal) containing 2
Tssr163029 X 17251295 to 17251323 28 - TSS region transcription start site region 163029
Gm35105 X 17251541 to 17454628 203087 + lncRNA gene predicted gene, 35105
Tssr160619 X 17251545 to 17251558 13 + TSS region transcription start site region 160619
Gm14514 X 17252741 to 17254397 1656 + pseudogene predicted gene 14514
Tssr163030 X 17319316 to 17319334 18 - TSS region transcription start site region 163030
Tssr163031 X 17319365 to 17319400 35 - TSS region transcription start site region 163031
Cpgi22638 X 17319380 to 17319583 203 CpG island CpG island 22638
Gm22294 X 17325315 to 17325418 103 + snRNA gene predicted gene, 22294
Gm39497 X 17393298 to 17516990 123692 - lncRNA gene predicted gene, 39497