Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:162728595-162929682

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30 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm15201 X 162735078 to 162736613 1535 - lncRNA gene predicted gene 15201
Gm23786 X 162748556 to 162748674 118 + snoRNA gene predicted gene, 23786
Cpgi23037 X 162759923 to 162761431 1508 CpG island CpG island 23037
Tssr162584 X 162760367 to 162760378 11 + TSS region transcription start site region 162584
Tssr162585 X 162760388 to 162760415 27 + TSS region transcription start site region 162585
Rbbp7 X 162760402 to 162779092 18690 + protein coding gene retinoblastoma binding protein 7, chromatin remodeling factor
Tssr162586 X 162760427 to 162760488 61 + TSS region transcription start site region 162586
Txlng X 162778919 to 162829454 50535 - protein coding gene taxilin gamma
Cpgi23038 X 162828595 to 162829682 1087 CpG island CpG island 23038
Tssr164512 X 162829338 to 162829373 35 - TSS region transcription start site region 164512
Tssr164513 X 162829379 to 162829402 23 - TSS region transcription start site region 164513
Gm16459 X 162844870 to 162845523 653 + pseudogene predicted gene 16459
Gm15207 X 162845825 to 162846266 441 - pseudogene predicted gene 15207
Tssr162587 X 162846004 to 162846016 12 + TSS region transcription start site region 162587
Gm23901 X 162850158 to 162850264 106 - snRNA gene predicted gene, 23901
Syap1 X 162857057 to 162888447 31390 - protein coding gene synapse associated protein 1
Mir3473a X 162874918 to 162874995 77 - miRNA gene microRNA 3473a
Cpgi23039 X 162887944 to 162888513 569 CpG island CpG island 23039
Tssr164514 X 162888374 to 162888401 27 - TSS region transcription start site region 164514
Tssr164515 X 162888412 to 162888423 11 - TSS region transcription start site region 164515
Tssr164516 X 162888426 to 162888473 47 - TSS region transcription start site region 164516
Gm15209 X 162894755 to 162895154 399 - pseudogene predicted gene 15209
Tssr162588 X 162901226 to 162901261 35 + TSS region transcription start site region 162588
Ctps2 X 162901238 to 163032508 131270 + protein coding gene cytidine 5'-triphosphate synthase 2
Tssr162589 X 162901567 to 162901677 110 + TSS region transcription start site region 162589
Cpgi23040 X 162901677 to 162901882 205 CpG island CpG island 23040
Tssr162590 X 162901679 to 162901693 14 + TSS region transcription start site region 162590
Tssr162591 X 162901694 to 162901733 39 + TSS region transcription start site region 162591
Tssr162592 X 162901762 to 162901773 11 + TSS region transcription start site region 162592
Gm19107 X 162908021 to 162908929 908 - pseudogene predicted gene, 19107