Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:162541384-162841533

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Reps2 X 162411954 to 162643649 231695 - protein coding gene RALBP1 associated Eps domain containing protein 2
Tssr164505 X 162552573 to 162552612 39 - TSS region transcription start site region 164505
Tssr164506 X 162552740 to 162552757 17 - TSS region transcription start site region 164506
Tssr164507 X 162565606 to 162565617 11 - TSS region transcription start site region 164507
Tssr162582 X 162566809 to 162566818 9 + TSS region transcription start site region 162582
Gm7331 X 162566857 to 162567243 386 + pseudogene predicted gene 7331
Gm15206 X 162576618 to 162577071 453 - pseudogene predicted gene 15206
Tssr162583 X 162638087 to 162638093 6 + TSS region transcription start site region 162583
Cpgi23036 X 162643209 to 162643985 776 CpG island CpG island 23036
Tssr164508 X 162643463 to 162643474 11 - TSS region transcription start site region 164508
Tssr164509 X 162643546 to 162643573 27 - TSS region transcription start site region 164509
Tssr164510 X 162643575 to 162643622 47 - TSS region transcription start site region 164510
Tssr164511 X 162643629 to 162643665 36 - TSS region transcription start site region 164511
Gm15203 X 162679007 to 162679461 454 + pseudogene predicted gene 15203
Gm22257 X 162687880 to 162688180 300 + unclassified non-coding RNA gene predicted gene, 22257
Pgia39 X 162691384 to 162691533 149 QTL proteoglycan induced arthritis 39
Pgia25 X 162691384 to 162691533 149 QTL proteoglycan induced arthritis 25
DXMit5 X 162691384 to 162691533 149 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 5
Gm25557 X 162693249 to 162693563 314 + unclassified non-coding RNA gene predicted gene, 25557
Gm8737 X 162697612 to 162698250 638 + pseudogene predicted gene 8737
Gm15201 X 162735078 to 162736613 1535 - lncRNA gene predicted gene 15201
Gm23786 X 162748556 to 162748674 118 + snoRNA gene predicted gene, 23786
Cpgi23037 X 162759923 to 162761431 1508 CpG island CpG island 23037
Tssr162584 X 162760367 to 162760378 11 + TSS region transcription start site region 162584
Tssr162585 X 162760388 to 162760415 27 + TSS region transcription start site region 162585
Rbbp7 X 162760402 to 162779092 18690 + protein coding gene retinoblastoma binding protein 7, chromatin remodeling factor
Tssr162586 X 162760427 to 162760488 61 + TSS region transcription start site region 162586
Txlng X 162778919 to 162829454 50535 - protein coding gene taxilin gamma
Cpgi23038 X 162828595 to 162829682 1087 CpG island CpG island 23038
Tssr164512 X 162829338 to 162829373 35 - TSS region transcription start site region 164512
Tssr164513 X 162829379 to 162829402 23 - TSS region transcription start site region 164513