Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:161225567-161746485

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18 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cia19 X 122083468 to 161430042 39346574 QTL collagen induced arthritis QTL 19
Scml2 X 161117193 to 161258213 141020 + protein coding gene Scm polycomb group protein like 2
Gm5419 X 161272237 to 161272840 603 - pseudogene predicted gene 5419
Tssr162572 X 161297767 to 161297778 11 + TSS region transcription start site region 162572
Tssr162573 X 161297793 to 161297806 13 + TSS region transcription start site region 162573
Gm15262 X 161297856 to 161334722 36866 + protein coding gene predicted gene 15262
Gm36049 X 161357881 to 161364590 6709 + protein coding gene predicted gene, 36049
DXMit121.1 X 161429749 to 161429897 148 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 121.1
DXMit121 X 161429897 to 161430042 145 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 121
Obsty5 X 161429897 to 165366288 3936391 QTL obesity 5
Prkaca-ps1 X 161485567 to 161486485 918 - pseudogene protein kinase, cAMP dependent, catalytic, alpha pseudogene 1
Cpgi23033 X 161716734 to 161717942 1208 CpG island CpG island 23033
Tssr162574 X 161717025 to 161717039 14 + TSS region transcription start site region 162574
Tssr162575 X 161717055 to 161717073 18 + TSS region transcription start site region 162575
Rai2 X 161717069 to 161779496 62427 + protein coding gene retinoic acid induced 2
Tssr162576 X 161717461 to 161717496 35 + TSS region transcription start site region 162576
Tssr162577 X 161717498 to 161717519 21 + TSS region transcription start site region 162577
Tssr5716 X 161717641 to 161717657 16 + TSS region transcription start site region 5716