MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region X:160922754-161403023

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cdkl5	X	160784308 to 160994681	210373	-	protein coding gene	cyclin-dependent kinase-like 5
Tssr164485	X	160976488 to 160976499	11	-	TSS region	transcription start site region 164485
Tssr164486	X	160976501 to 160976509	8	-	TSS region	transcription start site region 164486
Cpgi23030	X	160993975 to 160995127	1152		CpG island	CpG island 23030
Tssr164487	X	160994641 to 160994661	20	-	TSS region	transcription start site region 164487
Tssr164488	X	160994665 to 160994686	21	-	TSS region	transcription start site region 164488
Cpgi23031	X	160995404 to 160995570	166		CpG island	CpG island 23031
Tssr162569	X	161082504 to 161082537	33	+	TSS region	transcription start site region 162569
Scml2	X	161117193 to 161258213	141020	+	protein coding gene	Scm polycomb group protein like 2
n-TLtaa1	X	161135134 to 161135216	82	+	tRNA gene	nuclear encoded tRNA leucine 1 (anticodon TAA)
Tssr162570	X	161162744 to 161162775	31	+	TSS region	transcription start site region 162570
Cpgi23032	X	161162754 to 161163023	269		CpG island	CpG island 23032
Tssr162571	X	161162994 to 161163054	60	+	TSS region	transcription start site region 162571
Gm5419	X	161272237 to 161272840	603	-	pseudogene	predicted gene 5419
Tssr162572	X	161297767 to 161297778	11	+	TSS region	transcription start site region 162572
Tssr162573	X	161297793 to 161297806	13	+	TSS region	transcription start site region 162573
Gm15262	X	161297856 to 161334722	36866	+	protein coding gene	predicted gene 15262
Gm36049	X	161357881 to 161364590	6709	+	protein coding gene	predicted gene, 36049