Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:159349572-159563757

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rps6ka3 X 159255696 to 159368244 112548 + protein coding gene ribosomal protein S6 kinase polypeptide 3
Tssr162474 X 159364170 to 159364181 11 + TSS region transcription start site region 162474
Tssr162475 X 159364287 to 159364314 27 + TSS region transcription start site region 162475
Tssr162476 X 159364921 to 159364931 10 + TSS region transcription start site region 162476
Cpgi23022 X 159371774 to 159372702 928 CpG island CpG island 23022
Tssr162477 X 159371979 to 159372018 39 + TSS region transcription start site region 162477
Tssr162478 X 159372175 to 159372290 115 + TSS region transcription start site region 162478
Eif1ax X 159372195 to 159385699 13504 + protein coding gene eukaryotic translation initiation factor 1A, X-linked
Tssr162479 X 159372291 to 159372300 9 + TSS region transcription start site region 162479
Tssr162480 X 159372305 to 159372316 11 + TSS region transcription start site region 162480
Gm15187 X 159410247 to 159410510 263 - pseudogene predicted gene 15187
Cpgi23023 X 159414142 to 159415711 1569 CpG island CpG island 23023
Tssr162481 X 159414526 to 159414536 10 + TSS region transcription start site region 162481
Map7d2 X 159414572 to 159498757 84185 + protein coding gene MAP7 domain containing 2
Tssr162482 X 159414578 to 159414589 11 + TSS region transcription start site region 162482
Tssr162483 X 159414637 to 159414655 18 + TSS region transcription start site region 162483
Tssr162484 X 159414659 to 159414711 52 + TSS region transcription start site region 162484
Gm23806 X 159449277 to 159449385 108 + rRNA gene predicted gene, 23806
Tssr5713 X 159456411 to 159456424 13 + TSS region transcription start site region 5713
Tssr162485 X 159459133 to 159459165 32 + TSS region transcription start site region 162485
Tssr162486 X 159459167 to 159459193 26 + TSS region transcription start site region 162486
Tssr162487 X 159459199 to 159459214 15 + TSS region transcription start site region 162487
Tssr162488 X 159472840 to 159472854 14 + TSS region transcription start site region 162488
Tssr162489 X 159472867 to 159472881 14 + TSS region transcription start site region 162489
Tssr162490 X 159482275 to 159482294 19 + TSS region transcription start site region 162490
Tssr162491 X 159482985 to 159483001 16 + TSS region transcription start site region 162491
Tssr162492 X 159488812 to 159488815 3 + TSS region transcription start site region 162492
Tssr162493 X 159489309 to 159489327 18 + TSS region transcription start site region 162493
Gm39546 X 159507549 to 159516568 9019 - lncRNA gene predicted gene, 39546
Tssr5714 X 159508845 to 159508863 18 - TSS region transcription start site region 5714
DXMit33 X 159524832 to 159524962 130 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 33
Cpgi23024 X 159532449 to 159533655 1206 CpG island CpG island 23024
Bclaf3 X 159532640 to 159593081 60441 + protein coding gene Bclaf1 and Thrap3 family member 3
Tssr162494 X 159532655 to 159532668 13 + TSS region transcription start site region 162494
Tssr162495 X 159532674 to 159532748 74 + TSS region transcription start site region 162495
Tssr162496 X 159532762 to 159532775 13 + TSS region transcription start site region 162496
Panct1 X 159534484 to 159538528 4044 unclassified non-coding RNA gene pluripotency-associated noncoding transcript 1
4930422N03Rik X 159559977 to 159561973 1996 unclassified gene RIKEN cDNA 4930422N03 gene