Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:157472325-158613963

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77 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sms X 157443852 to 157492046 48194 - protein coding gene spermine synthase
Cpgi23016 X 157491247 to 157492347 1100 CpG island CpG island 23016
Tssr164456 X 157492022 to 157492059 37 - TSS region transcription start site region 164456
Tssr164457 X 157492061 to 157492081 20 - TSS region transcription start site region 164457
Tssr164458 X 157492177 to 157492246 69 - TSS region transcription start site region 164458
Tssr164459 X 157492280 to 157492340 60 - TSS region transcription start site region 164459
Gm19373 X 157518368 to 157518523 155 - pseudogene predicted gene, 19373
Tssr164460 X 157518583 to 157518600 17 - TSS region transcription start site region 164460
Tssr162431 X 157540680 to 157540685 5 + TSS region transcription start site region 162431
Gm6568 X 157540866 to 157541562 696 + pseudogene predicted pseudogene 6568
Mbtps2 X 157547822 to 157598715 50893 - protein coding gene membrane-bound transcription factor peptidase, site 2
Tssr164461 X 157557154 to 157557189 35 - TSS region transcription start site region 164461
Yy2 X 157566119 to 157568985 2866 - protein coding gene Yy2 transcription factor
Cpgi23017 X 157568935 to 157569147 212 CpG island CpG island 23017
Tssr164462 X 157568983 to 157568991 8 - TSS region transcription start site region 164462
Tssr164463 X 157579772 to 157579785 13 - TSS region transcription start site region 164463
Tssr164464 X 157595597 to 157595607 10 - TSS region transcription start site region 164464
Tssr162432 X 157598164 to 157598188 24 + TSS region transcription start site region 162432
Tssr162433 X 157598193 to 157598215 22 + TSS region transcription start site region 162433
Cpgi23018 X 157598197 to 157598936 739 CpG island CpG island 23018
Tssr164465 X 157598398 to 157598437 39 - TSS region transcription start site region 164465
Tssr164466 X 157598624 to 157598637 13 - TSS region transcription start site region 164466
Tssr164467 X 157598642 to 157598655 13 - TSS region transcription start site region 164467
Tssr164468 X 157598656 to 157598694 38 - TSS region transcription start site region 164468
Tssr162434 X 157598797 to 157598801 4 + TSS region transcription start site region 162434
Tssr162435 X 157598826 to 157598846 20 + TSS region transcription start site region 162435
Gm15176 X 157604033 to 157604167 134 - pseudogene predicted gene 15176
Gm15175 X 157604351 to 157604482 131 + pseudogene predicted gene 15175
Gm15173 X 157612689 to 157613121 432 - pseudogene predicted gene 15173
Gm23381 X 157638203 to 157638296 93 - rRNA gene predicted gene, 23381
Gm8644 X 157650704 to 157651299 595 - pseudogene predicted gene 8644
Gm15171 X 157663598 to 157663931 333 + pseudogene predicted gene 15171
Gm8648 X 157667565 to 157667785 220 - pseudogene predicted gene 8648
Smpx X 157698973 to 157752591 53618 + protein coding gene small muscle protein, X-linked
Tssr162436 X 157698985 to 157699013 28 + TSS region transcription start site region 162436
Tssr162437 X 157699069 to 157699076 7 + TSS region transcription start site region 162437
Tssr162438 X 157699113 to 157699134 21 + TSS region transcription start site region 162438
Tssr162439 X 157699153 to 157699166 13 + TSS region transcription start site region 162439
Tssr162440 X 157699184 to 157699205 21 + TSS region transcription start site region 162440
Tssr162441 X 157699206 to 157699217 11 + TSS region transcription start site region 162441
Tssr162442 X 157702489 to 157702500 11 + TSS region transcription start site region 162442
Tssr162443 X 157702574 to 157702585 11 + TSS region transcription start site region 162443
Tssr162444 X 157702763 to 157702778 15 + TSS region transcription start site region 162444
Tssr162445 X 157702791 to 157702827 36 + TSS region transcription start site region 162445
Tssr162446 X 157702832 to 157702841 9 + TSS region transcription start site region 162446
Tssr162447 X 157702849 to 157702856 7 + TSS region transcription start site region 162447
Tssr162448 X 157702868 to 157702878 10 + TSS region transcription start site region 162448
Tssr162449 X 157702887 to 157702914 27 + TSS region transcription start site region 162449
Tssr162450 X 157702949 to 157702964 15 + TSS region transcription start site region 162450
Tssr162451 X 157711172 to 157711196 24 + TSS region transcription start site region 162451
Tssr162452 X 157711366 to 157711378 12 + TSS region transcription start site region 162452
Tssr162453 X 157711388 to 157711399 11 + TSS region transcription start site region 162453
Tssr162454 X 157711532 to 157711541 9 + TSS region transcription start site region 162454
Tssr162455 X 157711543 to 157711561 18 + TSS region transcription start site region 162455
Tssr162456 X 157711565 to 157711576 11 + TSS region transcription start site region 162456
Tssr5711 X 157711584 to 157711590 6 + TSS region transcription start site region 5711
Gm15169 X 157757180 to 157759273 2093 - antisense lncRNA gene predicted gene 15169
Cpgi23019 X 157817632 to 157818031 399 CpG island CpG island 23019
Tssr162457 X 157817917 to 157817928 11 + TSS region transcription start site region 162457
Klhl34 X 157818435 to 157820369 1934 + protein coding gene kelch-like 34
Cnksr2 X 157821573 to 158043353 221780 - protein coding gene connector enhancer of kinase suppressor of Ras 2
Cpgi23020 X 158042325 to 158043963 1638 CpG island CpG island 23020
Tssr5712 X 158043130 to 158043139 9 - TSS region transcription start site region 5712
Tssr164469 X 158043206 to 158043260 54 - TSS region transcription start site region 164469
Tssr164470 X 158043266 to 158043286 20 - TSS region transcription start site region 164470
Tssr164471 X 158043405 to 158043425 20 - TSS region transcription start site region 164471
Tssr162458 X 158149825 to 158149828 3 + TSS region transcription start site region 162458
Gm8659 X 158150096 to 158151179 1083 + pseudogene predicted gene 8659
Gm15170 X 158174826 to 158177484 2658 + pseudogene predicted gene 15170
Tssr162459 X 158248773 to 158248774 1 + TSS region transcription start site region 162459
Gm8662 X 158248797 to 158249370 573 + pseudogene predicted gene 8662
Gm15177 X 158302921 to 158303497 576 + pseudogene predicted gene 15177
DXMit180 X 158372846 to 158372995 149 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 180
DXMit180.2 X 158372973 to 158373109 136 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 180.2
Gm22522 X 158373082 to 158373232 150 + snoRNA gene predicted gene, 22522
Tssr162460 X 158452536 to 158452539 3 + TSS region transcription start site region 162460
Gm15168 X 158503317 to 158503901 584 - pseudogene predicted gene 15168