Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:155283525-155963561

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Acot9 X 155262443 to 155297654 35211 + protein coding gene acyl-CoA thioesterase 9
4921511E18Rik X 155300711 to 155302689 1978 unclassified gene RIKEN cDNA 4921511E18 gene
Gm650 X 155304199 to 155305749 1550 - pseudogene predicted pseudogene 650
Prdx4 X 155323918 to 155340749 16831 - protein coding gene peroxiredoxin 4
Cpgi23013 X 155338151 to 155338580 429 CpG island CpG island 23013
Tssr164436 X 155338376 to 155338387 11 - TSS region transcription start site region 164436
Tssr164437 X 155338389 to 155338456 67 - TSS region transcription start site region 164437
Tssr164438 X 155338460 to 155338471 11 - TSS region transcription start site region 164438
Tssr164439 X 155338475 to 155338486 11 - TSS region transcription start site region 164439
Tssr164440 X 155340747 to 155340759 12 - TSS region transcription start site region 164440
Tssr164441 X 155340768 to 155340773 5 - TSS region transcription start site region 164441
Gm39545 X 155355287 to 155392524 37237 + lncRNA gene predicted gene, 39545
Gm15158 X 155477096 to 155477665 569 + pseudogene predicted gene 15158
Gm8606 X 155504037 to 155504924 887 - pseudogene predicted gene 8606
Tssr164442 X 155504938 to 155504947 9 - TSS region transcription start site region 164442
n-R5s16 X 155543290 to 155543408 118 + rRNA gene nuclear encoded rRNA 5S 16
DXDcr5 X 155566020 to 155566115 95 DNA segment DNA Segment, Chr X, Derry C. Roopenian 5
Tssr164443 X 155572436 to 155572437 1 - TSS region transcription start site region 164443
Ptchd1 X 155573455 to 155623814 50359 - protein coding gene patched domain containing 1
Tssr164444 X 155606298 to 155606300 2 - TSS region transcription start site region 164444
Tssr162424 X 155622649 to 155622665 16 + TSS region transcription start site region 162424
Cpgi23014 X 155622658 to 155624171 1513 CpG island CpG island 23014
Tssr162425 X 155622679 to 155622698 19 + TSS region transcription start site region 162425
Tssr162426 X 155622785 to 155622811 26 + TSS region transcription start site region 162426
Gm15156 X 155622789 to 155623361 572 + antisense lncRNA gene predicted gene 15156
Tssr164445 X 155623481 to 155623502 21 - TSS region transcription start site region 164445
Tssr164446 X 155623525 to 155623561 36 - TSS region transcription start site region 164446
Tssr164447 X 155623805 to 155623821 16 - TSS region transcription start site region 164447
Tssr164448 X 155624080 to 155624104 24 - TSS region transcription start site region 164448
Tssr164449 X 155624135 to 155624146 11 - TSS region transcription start site region 164449
Cpgi23015 X 155624594 to 155625097 503 CpG island CpG island 23015
Gm15155 X 155624846 to 156062072 437226 + protein coding gene predicted gene 15155
Tssr162427 X 155628065 to 155628071 6 + TSS region transcription start site region 162427
Tssr5709 X 155712219 to 155712224 5 - TSS region transcription start site region 5709
Tssr162428 X 155912002 to 155912005 3 + TSS region transcription start site region 162428
Gm15160 X 155922908 to 155923427 519 + pseudogene predicted gene 15160