Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:154560270-155220314

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Svwq2 X 130000000 to 155000000 25000000 QTL seminal vesicle weight QTL 2
Samt2 X 154575228 to 154579330 4102 - protein coding gene spermatogenesis associated multipass transmembrane protein 2
Gm15142 X 154635586 to 154639130 3544 + pseudogene predicted gene 15142
Tssr5708 X 154685278 to 154685279 1 + TSS region transcription start site region 5708
Gm22359 X 154711258 to 154711365 107 + snRNA gene predicted gene, 22359
Gm39544 X 154733207 to 154738779 5572 + lncRNA gene predicted gene, 39544
Gm35136 X 154767593 to 154768808 1215 + lncRNA gene predicted gene, 35136
Gm8577 X 154774459 to 154775438 979 + pseudogene predicted gene 8577
Cldn34b1 X 154886805 to 154890267 3462 - protein coding gene claudin 34B1
Tssr164428 X 154890270 to 154890314 44 - TSS region transcription start site region 164428
Magea6 X 154924012 to 154935987 11975 - protein coding gene melanoma antigen, family A, 6
Magea3 X 154948543 to 154949505 962 - protein coding gene melanoma antigen, family A, 3
Gm6645 X 154972006 to 154974933 2927 - pseudogene predicted gene 6645
Gm25257 X 154979339 to 154979448 109 + snRNA gene predicted gene, 25257
Magea8 X 154985775 to 154995850 10075 - protein coding gene melanoma antigen, family A, 8
Magea2 X 155027201 to 155033313 6112 - protein coding gene melanoma antigen, family A, 2
Gm24268 X 155046610 to 155046719 109 + snRNA gene predicted gene, 24268
Magea5 X 155053061 to 155063145 10084 - protein coding gene melanoma antigen, family A, 5
Magea1 X 155088686 to 155089793 1107 - protein coding gene melanoma antigen, family A, 1
Cldn34b2 X 155124917 to 155128412 3495 - protein coding gene claudin 34B2
Tssr164429 X 155128409 to 155128440 31 - TSS region transcription start site region 164429
Gm25429 X 155139896 to 155140027 131 + snoRNA gene predicted gene, 25429
Gm4997 X 155150952 to 155151311 359 - pseudogene predicted gene 4997
Tssr162417 X 155154867 to 155154871 4 + TSS region transcription start site region 162417
Amd-ps1 X 155155195 to 155156188 993 + pseudogene S-adenosylmethionine decarboxylase, pseudogene 1
Tssr162418 X 155172446 to 155172448 2 + TSS region transcription start site region 162418
Tssr162419 X 155172522 to 155172554 32 + TSS region transcription start site region 162419
Gm8595 X 155179281 to 155179910 629 + pseudogene predicted gene 8595
Gm15157 X 155185679 to 155186380 701 + pseudogene predicted gene 15157
Sat1 X 155213132 to 155216449 3317 - protein coding gene spermidine/spermine N1-acetyl transferase 1
Tssr164430 X 155214104 to 155214138 34 - TSS region transcription start site region 164430
Tssr164431 X 155214879 to 155214882 3 - TSS region transcription start site region 164431
Tssr164432 X 155215680 to 155215723 43 - TSS region transcription start site region 164432
Tssr164433 X 155216338 to 155216369 31 - TSS region transcription start site region 164433
Tssr164434 X 155216374 to 155216405 31 - TSS region transcription start site region 164434
Cpgi23011 X 155216416 to 155216598 182 CpG island CpG island 23011
Tssr164435 X 155216444 to 155216456 12 - TSS region transcription start site region 164435