Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:153870367-154830378

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
DXMit133 X 153884644 to 153884778 134 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 133
Gm25895 X 153915116 to 153915215 99 - snRNA gene predicted gene, 25895
Samt1 X 154001590 to 154012640 11050 - protein coding gene spermatogenesis associated multipass transmembrane protein 1
4921511M17Rik X 154022780 to 154033827 11047 - protein coding gene RIKEN cDNA 4921511M17 gene
Gm10057 X 154043986 to 154055039 11053 - protein coding gene predicted gene 10057
Gm15143 X 154065313 to 154068139 2826 - pseudogene predicted gene 15143
Gm5947 X 154079685 to 154082526 2841 - pseudogene predicted pseudogene 5947
Gm15140 X 154109633 to 154120685 11052 - protein coding gene predicted gene 15140
Gm5645 X 154130958 to 154133971 3013 - pseudogene predicted pseudogene 5645
Gm16445 X 154152689 to 154155509 2820 - pseudogene predicted pseudogene 16445
Gm6620 X 154182913 to 154186149 3236 - pseudogene predicted gene 6620
Gm15147 X 154198754 to 154199236 482 - pseudogene predicted gene 15147
Gm5060 X 154226501 to 154227099 598 - pseudogene predicted gene 5060
Gm15141 X 154237234 to 154239503 2269 - pseudogene predicted gene 15141
4930524N10Rik X 154339225 to 154343392 4167 - protein coding gene RIKEN cDNA 4930524N10 gene
Tssr162416 X 154350367 to 154350378 11 + TSS region transcription start site region 162416
Tssr5707 X 154398209 to 154398248 39 + TSS region transcription start site region 5707
Gm5646 X 154399578 to 154402044 2466 + pseudogene predicted pseudogene 5646
Gm8569 X 154436056 to 154436702 646 + pseudogene predicted gene 8569
Samt4 X 154482002 to 154484682 2680 + protein coding gene spermatogenesis associated multipass transmembrane protein 4
Samt2 X 154575228 to 154579330 4102 - protein coding gene spermatogenesis associated multipass transmembrane protein 2
Gm15142 X 154635586 to 154639130 3544 + pseudogene predicted gene 15142
Tssr5708 X 154685278 to 154685279 1 + TSS region transcription start site region 5708
Gm22359 X 154711258 to 154711365 107 + snRNA gene predicted gene, 22359
Gm39544 X 154733207 to 154738779 5572 + lncRNA gene predicted gene, 39544
Gm35136 X 154767593 to 154768808 1215 + lncRNA gene predicted gene, 35136
Gm8577 X 154774459 to 154775438 979 + pseudogene predicted gene 8577