Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:153269368-153729381

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26 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Klf8 X 153237466 to 153396132 158666 + protein coding gene Kruppel-like factor 8
Tssr162402 X 153305703 to 153305735 32 + TSS region transcription start site region 162402
Tssr162403 X 153359575 to 153359590 15 + TSS region transcription start site region 162403
Tssr162404 X 153360091 to 153360107 16 + TSS region transcription start site region 162404
Gm7150 X 153403090 to 153404070 980 - pseudogene predicted gene 7150
Cpgi23010 X 153497842 to 153499313 1471 CpG island CpG island 23010
Tssr162405 X 153498166 to 153498172 6 + TSS region transcription start site region 162405
Tssr162406 X 153498177 to 153498191 14 + TSS region transcription start site region 162406
Tssr162407 X 153498202 to 153498224 22 + TSS region transcription start site region 162407
Ubqln2 X 153498232 to 153501562 3330 + protein coding gene ubiquilin 2
Tssr162408 X 153499345 to 153499358 13 + TSS region transcription start site region 162408
Tssr162409 X 153499368 to 153499381 13 + TSS region transcription start site region 162409
Tssr162410 X 153500298 to 153500310 12 + TSS region transcription start site region 162410
Tssr162411 X 153500331 to 153500362 31 + TSS region transcription start site region 162411
Gm15166 X 153509012 to 153509396 384 - pseudogene predicted gene 15166
Tssr162412 X 153558591 to 153558594 3 + TSS region transcription start site region 162412
Cypt3 X 153558593 to 153559429 836 + protein coding gene cysteine-rich perinuclear theca 3
Gm39543 X 153568014 to 153623291 55277 - lncRNA gene predicted gene, 39543
Gm25793 X 153576488 to 153576594 106 - snRNA gene predicted gene, 25793
Gm8534 X 153656606 to 153657371 765 + pseudogene predicted gene 8534
Kctd12b X 153685154 to 153696386 11232 - protein coding gene potassium channel tetramerisation domain containing 12b
Tssr164426 X 153696163 to 153696182 19 - TSS region transcription start site region 164426
Tssr164427 X 153696195 to 153696258 63 - TSS region transcription start site region 164427
Gm45022 X 153721157 to 153723881 2724 - antisense lncRNA gene predicted gene 45022
Nbdy X 153723554 to 153741296 17742 + protein coding gene negative regulator of P-body association
Tssr162413 X 153723581 to 153723646 65 + TSS region transcription start site region 162413