Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:151210672-151943859

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69 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Wnk3 X 151198078 to 151320152 122074 + protein coding gene WNK lysine deficient protein kinase 3
Rpl21-ps15 X 151215167 to 151215649 482 - pseudogene ribosomal protein L21, pseudogene 15
Gm26441 X 151261918 to 151262021 103 - snRNA gene predicted gene, 26441
A230072E10Rik X 151313335 to 151341879 28544 - antisense lncRNA gene RIKEN cDNA A230072E10 gene
DXMit10 X 151323804 to 151324042 238 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 10
Dbts2 X 151324042 to 7360056 -143963986 QTL diabetes 2
Cpgi22992 X 151343830 to 151345047 1217 CpG island CpG island 22992
Tssr162338 X 151343862 to 151343906 44 + TSS region transcription start site region 162338
Tssr162339 X 151344171 to 151344197 26 + TSS region transcription start site region 162339
Fam120c X 151344175 to 151471842 127667 + protein coding gene family with sequence similarity 120, member C
Tssr162340 X 151344207 to 151344240 33 + TSS region transcription start site region 162340
Tssr164391 X 151344810 to 151344830 20 - TSS region transcription start site region 164391
Tssr162341 X 151359338 to 151359342 4 + TSS region transcription start site region 162341
Gm17845 X 151364628 to 151366534 1906 - pseudogene predicted gene, 17845
Gm22248 X 151384494 to 151384643 149 + snRNA gene predicted gene, 22248
Gm6451 X 151413668 to 151414384 716 - pseudogene predicted gene 6451
Tssr164392 X 151414560 to 151414563 3 - TSS region transcription start site region 164392
Gm15148 X 151493114 to 151493269 155 - pseudogene predicted gene 15148
Cpgi22993 X 151520322 to 151521457 1135 CpG island CpG island 22993
Tssr162342 X 151520655 to 151520681 26 + TSS region transcription start site region 162342
Phf8 X 151520672 to 151633859 113187 + protein coding gene PHD finger protein 8
Tssr164393 X 151520986 to 151520997 11 - TSS region transcription start site region 164393
Tssr5701 X 151521014 to 151521017 3 - TSS region transcription start site region 5701
Tssr162343 X 151521146 to 151521206 60 + TSS region transcription start site region 162343
Tssr162344 X 151522352 to 151522384 32 + TSS region transcription start site region 162344
Gm24460 X 151539700 to 151539805 105 - snoRNA gene predicted gene, 24460
5730419A17Rik X 151542314 to 151543084 770 unclassified gene RIKEN cDNA 5730419A17 gene
DXMit197 X 151549536 to 151549655 119 DNA segment DNA Segment, Chr X, Massachusetts Institute of Technology 197
Tssr162345 X 151593962 to 151593966 4 + TSS region transcription start site region 162345
Gm5395 X 151655188 to 151656099 911 + pseudogene predicted gene 5395
Gm15151 X 151758017 to 151758193 176 - pseudogene predicted gene 15151
Gm4919 X 151761943 to 151762658 715 - pseudogene predicted gene 4919
Tssr164394 X 151762690 to 151762696 6 - TSS region transcription start site region 164394
n-R5s13 X 151777671 to 151777789 118 + rRNA gene nuclear encoded rRNA 5S 13
Tssr162346 X 151780628 to 151780636 8 + TSS region transcription start site region 162346
Gm15161 X 151783522 to 151783908 386 + pseudogene predicted gene 15161
Gm18498 X 151798389 to 151799736 1347 + pseudogene predicted gene, 18498
Tssr162347 X 151800777 to 151800812 35 + TSS region transcription start site region 162347
Huwe1 X 151800807 to 151935417 134610 + protein coding gene HECT, UBA and WWE domain containing 1
Tssr162348 X 151800873 to 151800912 39 + TSS region transcription start site region 162348
Tssr162349 X 151801013 to 151801083 70 + TSS region transcription start site region 162349
Tssr162350 X 151801144 to 151801161 17 + TSS region transcription start site region 162350
Tssr162351 X 151801163 to 151801203 40 + TSS region transcription start site region 162351
Tssr5702 X 151801208 to 151801226 18 + TSS region transcription start site region 5702
Cpgi22994 X 151801219 to 151801495 276 CpG island CpG island 22994
Cpgi22995 X 151802920 to 151804010 1090 CpG island CpG island 22995
Tssr162352 X 151803236 to 151803243 7 + TSS region transcription start site region 162352
Tssr162353 X 151803276 to 151803287 11 + TSS region transcription start site region 162353
Tssr162354 X 151803313 to 151803376 63 + TSS region transcription start site region 162354
Tssr162355 X 151803399 to 151803404 5 + TSS region transcription start site region 162355
Tssr162356 X 151803408 to 151803419 11 + TSS region transcription start site region 162356
Tssr162357 X 151803642 to 151803673 31 + TSS region transcription start site region 162357
Tssr164395 X 151803692 to 151803703 11 - TSS region transcription start site region 164395
Tssr162358 X 151858204 to 151858208 4 + TSS region transcription start site region 162358
Mir3113 X 151859562 to 151859637 75 + miRNA gene microRNA 3113
Tssr162359 X 151883483 to 151883492 9 + TSS region transcription start site region 162359
Tssr162360 X 151902107 to 151902109 2 + TSS region transcription start site region 162360
Tssr162361 X 151906304 to 151906318 14 + TSS region transcription start site region 162361
Tssr162362 X 151909540 to 151909562 22 + TSS region transcription start site region 162362
Tssr162363 X 151909851 to 151909866 15 + TSS region transcription start site region 162363
Tssr162364 X 151910160 to 151910174 14 + TSS region transcription start site region 162364
Mirc49 X 151912346 to 151913321 975 complex/cluster/region microRNA cluster 49, including Mirlet7f-2 through Mir98
Mirlet7f-2 X 151912346 to 151912428 82 + miRNA gene microRNA let7f-2
Mir98 X 151913214 to 151913321 107 + miRNA gene microRNA 98
Tssr162365 X 151913839 to 151913846 7 + TSS region transcription start site region 162365
Tssr162366 X 151919639 to 151919650 11 + TSS region transcription start site region 162366
Tssr162367 X 151919793 to 151919808 15 + TSS region transcription start site region 162367
Tssr162368 X 151928253 to 151928293 40 + TSS region transcription start site region 162368
Tssr162369 X 151934411 to 151934445 34 + TSS region transcription start site region 162369