Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:150496421-151124340

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86 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr162303 X 150497504 to 150497519 15 + TSS region transcription start site region 162303
Apex2 X 150519519 to 150589868 70349 - protein coding gene apurinic/apyrimidinic endonuclease 2
Mir3620 X 150547385 to 150547445 60 - miRNA gene microRNA 3620
Alas2 X 150547417 to 150570622 23205 + protein coding gene aminolevulinic acid synthase 2, erythroid
Tssr162304 X 150547437 to 150547452 15 + TSS region transcription start site region 162304
Tssr162305 X 150550940 to 150550954 14 + TSS region transcription start site region 162305
Tssr162306 X 150550964 to 150550982 18 + TSS region transcription start site region 162306
Tssr162307 X 150552140 to 150552180 40 + TSS region transcription start site region 162307
Tssr5699 X 150552267 to 150552282 15 + TSS region transcription start site region 5699
Tssr162308 X 150554005 to 150554018 13 + TSS region transcription start site region 162308
Tssr164362 X 150559779 to 150559782 3 - TSS region transcription start site region 164362
Tssr162309 X 150565226 to 150565241 15 + TSS region transcription start site region 162309
Tssr162310 X 150566601 to 150566629 28 + TSS region transcription start site region 162310
Tssr164363 X 150583915 to 150583919 4 - TSS region transcription start site region 164363
Cpgi22987 X 150588008 to 150588189 181 CpG island CpG island 22987
Tssr164364 X 150588044 to 150588057 13 - TSS region transcription start site region 164364
Tssr164365 X 150588073 to 150588153 80 - TSS region transcription start site region 164365
Tssr162311 X 150588223 to 150588260 37 + TSS region transcription start site region 162311
Pfkfb1 X 150588258 to 150643878 55620 + protein coding gene 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1
Tssr164366 X 150589809 to 150589821 12 - TSS region transcription start site region 164366
Tssr164367 X 150589847 to 150589861 14 - TSS region transcription start site region 164367
Tssr164368 X 150589863 to 150589888 25 - TSS region transcription start site region 164368
Tssr162312 X 150589886 to 150589899 13 + TSS region transcription start site region 162312
Tssr162313 X 150589907 to 150589996 89 + TSS region transcription start site region 162313
Tssr162314 X 150590037 to 150590046 9 + TSS region transcription start site region 162314
Tssr162315 X 150593940 to 150593945 5 + TSS region transcription start site region 162315
Tssr162316 X 150594325 to 150594336 11 + TSS region transcription start site region 162316
Tssr162317 X 150594338 to 150594358 20 + TSS region transcription start site region 162317
Tssr162318 X 150594393 to 150594413 20 + TSS region transcription start site region 162318
Tssr162319 X 150594420 to 150594446 26 + TSS region transcription start site region 162319
Tssr164369 X 150594775 to 150594781 6 - TSS region transcription start site region 164369
Tro X 150645304 to 150657583 12279 - protein coding gene trophinin
Tssr164370 X 150654867 to 150654912 45 - TSS region transcription start site region 164370
Tssr164371 X 150655578 to 150655596 18 - TSS region transcription start site region 164371
Tssr164372 X 150657122 to 150657133 11 - TSS region transcription start site region 164372
Tssr164373 X 150657366 to 150657377 11 - TSS region transcription start site region 164373
Tssr164374 X 150657392 to 150657407 15 - TSS region transcription start site region 164374
Gm15132 X 150688145 to 150688796 651 + pseudogene predicted gene 15132
Gm15131 X 150707021 to 150707615 594 - pseudogene predicted gene 15131
Gm33991 X 150710574 to 150712406 1832 + lncRNA gene predicted gene, 33991
Gm18773 X 150780580 to 150782197 1617 - pseudogene predicted gene, 18773
Maged2 X 150806421 to 150814340 7919 - protein coding gene melanoma antigen, family D, 2
Gm24907 X 150807859 to 150807986 127 - snoRNA gene predicted gene, 24907
Tssr164375 X 150812448 to 150812489 41 - TSS region transcription start site region 164375
Tssr164376 X 150812789 to 150812805 16 - TSS region transcription start site region 164376
Tssr164377 X 150812877 to 150812930 53 - TSS region transcription start site region 164377
Tssr164378 X 150812932 to 150812973 41 - TSS region transcription start site region 164378
Tssr164379 X 150813637 to 150813712 75 - TSS region transcription start site region 164379
Tssr164380 X 150814252 to 150814263 11 - TSS region transcription start site region 164380
Tssr164381 X 150814265 to 150814320 55 - TSS region transcription start site region 164381
Tssr164382 X 150815644 to 150815688 44 - TSS region transcription start site region 164382
Tssr162320 X 150826925 to 150826929 4 + TSS region transcription start site region 162320
Itih5l-ps X 150826972 to 150857053 30081 + pseudogene inter-alpha (globulin) inhibitor H5-like, pseudogene
Gm10437 X 150838363 to 150842025 3662 unclassified gene predicted gene 10437
Gm27191 X 150848838 to 150849378 540 - lincRNA gene predicted gene 27191
Gm8424 X 150924620 to 150926159 1539 - pseudogene predicted gene 8424
Tssr164383 X 150954764 to 150954801 37 - TSS region transcription start site region 164383
Tssr164384 X 150954845 to 150954852 7 - TSS region transcription start site region 164384
Tssr164385 X 150954856 to 150954868 12 - TSS region transcription start site region 164385
Tssr164386 X 150954886 to 150954898 12 - TSS region transcription start site region 164386
Gnl3l X 150983141 to 151017322 34181 - protein coding gene guanine nucleotide binding protein-like 3 (nucleolar)-like
Tssr164387 X 150986084 to 150986115 31 - TSS region transcription start site region 164387
Lgth14 X 151000000 to 95000000 -56000000 QTL body length 14
Wght12 X 151000000 to 95000000 -56000000 QTL weight 12
Gm15152 X 151005870 to 151006528 658 + pseudogene predicted gene 15152
Cpgi22988 X 151017159 to 151017419 260 CpG island CpG island 22988
Tssr164388 X 151017226 to 151017249 23 - TSS region transcription start site region 164388
Tssr164389 X 151017251 to 151017296 45 - TSS region transcription start site region 164389
Gm46690 X 151041242 to 151046015 4773 - lncRNA gene predicted gene, 46690
Tssr162321 X 151046131 to 151046143 12 + TSS region transcription start site region 162321
Fgd1 X 151046150 to 151089521 43371 + protein coding gene FYVE, RhoGEF and PH domain containing 1
Cpgi22989 X 151046700 to 151048050 1350 CpG island CpG island 22989
Tssr162322 X 151046881 to 151046905 24 + TSS region transcription start site region 162322
Tssr162323 X 151046912 to 151046933 21 + TSS region transcription start site region 162323
Tssr162324 X 151046946 to 151046975 29 + TSS region transcription start site region 162324
Tssr162325 X 151046979 to 151046993 14 + TSS region transcription start site region 162325
Tssr162326 X 151047193 to 151047227 34 + TSS region transcription start site region 162326
Tssr162327 X 151047310 to 151047327 17 + TSS region transcription start site region 162327
Tssr162328 X 151047333 to 151047357 24 + TSS region transcription start site region 162328
DXMit153 X 151055859 to 151056001 142 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 153
Tssr162329 X 151066742 to 151066753 11 + TSS region transcription start site region 162329
Tssr162330 X 151072354 to 151072363 9 + TSS region transcription start site region 162330
Tsr2 X 151087094 to 151096543 9449 - protein coding gene TSR2 20S rRNA accumulation
Cpgi22990 X 151096080 to 151096653 573 CpG island CpG island 22990
Tssr164390 X 151096510 to 151096530 20 - TSS region transcription start site region 164390
Tssr162331 X 151120879 to 151120883 4 + TSS region transcription start site region 162331