Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:149099742-150620913

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80 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ott X 149097952 to 149138152 40200 + protein coding gene ovary testis transcribed
Gm15088 X 149157977 to 149159484 1507 + pseudogene predicted gene 15088
Gm15090 X 149162650 to 149163845 1195 + pseudogene predicted gene 15090
Gm8346 X 149211319 to 149213087 1768 + pseudogene predicted gene 8346
Gm15093 X 149272377 to 149305003 32626 + protein coding gene predicted gene 15093
Gm15098 X 149327076 to 149328583 1507 + pseudogene predicted gene 15098
Gm15089 X 149331749 to 149332944 1195 + pseudogene predicted gene 15089
Gm8366 X 149380417 to 149382185 1768 + pseudogene predicted gene 8366
Gm6499 X 149392667 to 149394297 1630 - pseudogene predicted gene 6499
Gm15100 X 149446885 to 149447585 700 - antisense lncRNA gene predicted gene 15100
Gm15085 X 149447617 to 149487784 40167 + protein coding gene predicted gene 15085
Gm2346 X 149506004 to 149507751 1747 - pseudogene predicted gene 2346
Gm15086 X 149593838 to 149594538 700 - antisense lncRNA gene predicted gene 15086
Gm10439 X 149594601 to 149636621 42020 + protein coding gene predicted gene 10439
Gm15101 X 149658834 to 149660335 1501 + pseudogene predicted gene 15101
Gm8383 X 149716151 to 149717920 1769 + pseudogene predicted gene 8383
Gm8389 X 149728018 to 149729663 1645 - pseudogene predicted gene 8389
Gm15097 X 149784473 to 149826694 42221 + protein coding gene predicted gene 15097
Gm15095 X 149848723 to 149850152 1429 + pseudogene predicted gene 15095
Gm15087 X 149859742 to 149860913 1171 + pseudogene predicted gene 15087
Gm6512 X 149897436 to 149898967 1531 - pseudogene predicted gene 6512
Gm15091 X 149941655 to 149984982 43327 + protein coding gene predicted gene 15091
Ferq1 X 150000000 to 55000000 -95000000 QTL genetic fertility QTL 1
Gm15102 X 150013711 to 150015118 1407 + pseudogene predicted gene 15102
Gm15103 X 150032993 to 150034051 1058 + pseudogene predicted gene 15103
Gm8402 X 150083529 to 150085298 1769 + pseudogene predicted gene 8402
Gm21929 X 150095681 to 150097386 1705 - pseudogene predicted gene, 21929
Tssr162302 X 150147492 to 150147503 11 + TSS region transcription start site region 162302
Gm20153 X 150157426 to 150177319 19893 - protein coding gene predicted gene, 20153
Tssr164350 X 150177281 to 150177284 3 - TSS region transcription start site region 164350
Gm5946 X 150220899 to 150223351 2452 - pseudogene predicted gene 5946
Gm15104 X 150312601 to 150333065 20464 - lincRNA gene predicted gene 15104
Tssr164351 X 150336289 to 150336292 3 - TSS region transcription start site region 164351
Tssr164352 X 150367160 to 150367164 4 - TSS region transcription start site region 164352
Gm15105 X 150367713 to 150367916 203 - pseudogene predicted gene 15105
Tmem29 X 150397773 to 150459154 61381 - protein coding gene transmembrane protein 29
Tssr164353 X 150415077 to 150415090 13 - TSS region transcription start site region 164353
Gm15129 X 150431503 to 150431781 278 + pseudogene predicted gene 15129
Tssr164354 X 150435482 to 150435490 8 - TSS region transcription start site region 164354
Tssr164355 X 150435510 to 150435541 31 - TSS region transcription start site region 164355
Tssr164356 X 150440835 to 150440846 11 - TSS region transcription start site region 164356
Tssr164357 X 150440887 to 150440937 50 - TSS region transcription start site region 164357
Tssr164358 X 150441058 to 150441069 11 - TSS region transcription start site region 164358
Tssr164359 X 150457376 to 150457379 3 - TSS region transcription start site region 164359
Tssr164360 X 150458803 to 150458808 5 - TSS region transcription start site region 164360
Cpgi22986 X 150459017 to 150459241 224 CpG island CpG island 22986
Tssr164361 X 150459128 to 150459157 29 - TSS region transcription start site region 164361
3110067C02Rik X 150463648 to 150465728 2080 + pseudogene RIKEN cDNA 3110067C02 gene
Gm46684 X 150490010 to 150496271 6261 - lncRNA gene predicted gene, 46684
Tssr162303 X 150497504 to 150497519 15 + TSS region transcription start site region 162303
Apex2 X 150519519 to 150589868 70349 - protein coding gene apurinic/apyrimidinic endonuclease 2
Mir3620 X 150547385 to 150547445 60 - miRNA gene microRNA 3620
Alas2 X 150547417 to 150570622 23205 + protein coding gene aminolevulinic acid synthase 2, erythroid
Tssr162304 X 150547437 to 150547452 15 + TSS region transcription start site region 162304
Tssr162305 X 150550940 to 150550954 14 + TSS region transcription start site region 162305
Tssr162306 X 150550964 to 150550982 18 + TSS region transcription start site region 162306
Tssr162307 X 150552140 to 150552180 40 + TSS region transcription start site region 162307
Tssr5699 X 150552267 to 150552282 15 + TSS region transcription start site region 5699
Tssr162308 X 150554005 to 150554018 13 + TSS region transcription start site region 162308
Tssr164362 X 150559779 to 150559782 3 - TSS region transcription start site region 164362
Tssr162309 X 150565226 to 150565241 15 + TSS region transcription start site region 162309
Tssr162310 X 150566601 to 150566629 28 + TSS region transcription start site region 162310
Tssr164363 X 150583915 to 150583919 4 - TSS region transcription start site region 164363
Cpgi22987 X 150588008 to 150588189 181 CpG island CpG island 22987
Tssr164364 X 150588044 to 150588057 13 - TSS region transcription start site region 164364
Tssr164365 X 150588073 to 150588153 80 - TSS region transcription start site region 164365
Tssr162311 X 150588223 to 150588260 37 + TSS region transcription start site region 162311
Pfkfb1 X 150588258 to 150643878 55620 + protein coding gene 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1
Tssr164366 X 150589809 to 150589821 12 - TSS region transcription start site region 164366
Tssr164367 X 150589847 to 150589861 14 - TSS region transcription start site region 164367
Tssr164368 X 150589863 to 150589888 25 - TSS region transcription start site region 164368
Tssr162312 X 150589886 to 150589899 13 + TSS region transcription start site region 162312
Tssr162313 X 150589907 to 150589996 89 + TSS region transcription start site region 162313
Tssr162314 X 150590037 to 150590046 9 + TSS region transcription start site region 162314
Tssr162315 X 150593940 to 150593945 5 + TSS region transcription start site region 162315
Tssr162316 X 150594325 to 150594336 11 + TSS region transcription start site region 162316
Tssr162317 X 150594338 to 150594358 20 + TSS region transcription start site region 162317
Tssr162318 X 150594393 to 150594413 20 + TSS region transcription start site region 162318
Tssr162319 X 150594420 to 150594446 26 + TSS region transcription start site region 162319
Tssr164369 X 150594775 to 150594781 6 - TSS region transcription start site region 164369