Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:147278112-150199135

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78 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Il13ra2 X 147383478 to 147429192 45714 - protein coding gene interleukin 13 receptor, alpha 2
Tssr164346 X 147428774 to 147428818 44 - TSS region transcription start site region 164346
Tssr164347 X 147429189 to 147429192 3 - TSS region transcription start site region 164347
Vmn1r239-ps X 147452748 to 147453707 959 - pseudogene vomeronasal 1 receptor 239, pseudogene
Lrch2 X 147470375 to 147554081 83706 - protein coding gene leucine-rich repeats and calponin homology (CH) domain containing 2
Gm25107 X 147484293 to 147484421 128 - snoRNA gene predicted gene, 25107
Cpgi22984 X 147553554 to 147553821 267 CpG island CpG island 22984
Cpgi22985 X 147553872 to 147554029 157 CpG island CpG island 22985
Tssr164348 X 147554051 to 147554087 36 - TSS region transcription start site region 164348
Tssr164349 X 147554097 to 147554110 13 - TSS region transcription start site region 164349
Tssr162301 X 147703008 to 147703033 25 + TSS region transcription start site region 162301
Gm16400 X 147720978 to 147722888 1910 + pseudogene predicted gene 16400
Gm15167 X 147733154 to 147733481 327 + pseudogene predicted gene 15167
Gm8289 X 147742082 to 147747608 5526 + pseudogene predicted gene 8289
DXMit152 X 147743763 to 147743881 118 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 152
Gm15128 X 147789653 to 147833116 43463 + protein coding gene predicted gene 15128
Gm6464 X 147843200 to 147844784 1584 - pseudogene predicted gene 6464
Gm15081 X 147927646 to 147928489 843 + pseudogene predicted gene 15081
Gm21928 X 147939842 to 147941547 1705 - pseudogene predicted gene, 21928
Gm15080 X 147992993 to 148033174 40181 + protein coding gene predicted gene 15080
Gm15108 X 148055249 to 148056743 1494 + pseudogene predicted gene 15108
Gm15110 X 148059921 to 148061106 1185 + pseudogene predicted gene 15110
Gm8303 X 148108570 to 148110331 1761 + pseudogene predicted gene 8303
Gm2286 X 148120744 to 148122491 1747 - pseudogene predicted gene 2286
Gm15107 X 148180724 to 148224710 43986 + protein coding gene predicted gene 15107
Gm6470 X 148234403 to 148236045 1642 - pseudogene predicted gene 6470
Gm15109 X 148314419 to 148354726 40307 + pseudogene predicted gene 15109
Gm15111 X 148374561 to 148376058 1497 + pseudogene predicted gene 15111
Gm15113 X 148379234 to 148380419 1185 + pseudogene predicted gene 15113
Gm8320 X 148427884 to 148429645 1761 + pseudogene predicted gene 8320
Gm2307 X 148440107 to 148441854 1747 - pseudogene predicted gene 2307
Gm15114 X 148488949 to 148521446 32497 + protein coding gene predicted gene 15114
Gm15106 X 148543504 to 148544995 1491 + pseudogene predicted gene 15106
Gm15112 X 148548192 to 148549359 1167 + pseudogene predicted gene 15112
Gm8331 X 148596836 to 148598597 1761 + pseudogene predicted gene 8331
Gm8334 X 148613223 to 148614970 1747 - pseudogene predicted gene 8334
Gm15127 X 148663598 to 148703849 40251 + protein coding gene predicted gene 15127
Gm15125 X 148725882 to 148727373 1491 + pseudogene predicted gene 15125
Gm15126 X 148738112 to 148739135 1023 + pseudogene predicted gene 15126
Kars-ps1 X 148788557 to 148790323 1766 + pseudogene lysyl-tRNA synthetase, pseudogene 1
Gm6488 X 148800693 to 148802341 1648 - pseudogene predicted gene 6488
Luzp4 X 148857694 to 148924139 66445 + protein coding gene leucine zipper protein 4
Gm15099 X 148881844 to 148882544 700 - antisense lncRNA gene predicted gene 15099
Gm15084 X 148946235 to 148947736 1501 + pseudogene predicted gene 15084
Gm15094 X 148958712 to 148959842 1130 + pseudogene predicted gene 15094
Gm15096 X 149008973 to 149009850 877 + pseudogene predicted gene 15096
Gm6492 X 149021169 to 149022760 1591 - pseudogene predicted gene 6492
Gm15092 X 149097219 to 149097920 701 - antisense lncRNA gene predicted gene 15092
Ott X 149097952 to 149138152 40200 + protein coding gene ovary testis transcribed
Gm15088 X 149157977 to 149159484 1507 + pseudogene predicted gene 15088
Gm15090 X 149162650 to 149163845 1195 + pseudogene predicted gene 15090
Gm8346 X 149211319 to 149213087 1768 + pseudogene predicted gene 8346
Gm15093 X 149272377 to 149305003 32626 + protein coding gene predicted gene 15093
Gm15098 X 149327076 to 149328583 1507 + pseudogene predicted gene 15098
Gm15089 X 149331749 to 149332944 1195 + pseudogene predicted gene 15089
Gm8366 X 149380417 to 149382185 1768 + pseudogene predicted gene 8366
Gm6499 X 149392667 to 149394297 1630 - pseudogene predicted gene 6499
Gm15100 X 149446885 to 149447585 700 - antisense lncRNA gene predicted gene 15100
Gm15085 X 149447617 to 149487784 40167 + protein coding gene predicted gene 15085
Gm2346 X 149506004 to 149507751 1747 - pseudogene predicted gene 2346
Gm15086 X 149593838 to 149594538 700 - antisense lncRNA gene predicted gene 15086
Gm10439 X 149594601 to 149636621 42020 + protein coding gene predicted gene 10439
Gm15101 X 149658834 to 149660335 1501 + pseudogene predicted gene 15101
Gm8383 X 149716151 to 149717920 1769 + pseudogene predicted gene 8383
Gm8389 X 149728018 to 149729663 1645 - pseudogene predicted gene 8389
Gm15097 X 149784473 to 149826694 42221 + protein coding gene predicted gene 15097
Gm15095 X 149848723 to 149850152 1429 + pseudogene predicted gene 15095
Gm15087 X 149859742 to 149860913 1171 + pseudogene predicted gene 15087
Gm6512 X 149897436 to 149898967 1531 - pseudogene predicted gene 6512
Gm15091 X 149941655 to 149984982 43327 + protein coding gene predicted gene 15091
Ferq1 X 150000000 to 55000000 -95000000 QTL genetic fertility QTL 1
Gm15102 X 150013711 to 150015118 1407 + pseudogene predicted gene 15102
Gm15103 X 150032993 to 150034051 1058 + pseudogene predicted gene 15103
Gm8402 X 150083529 to 150085298 1769 + pseudogene predicted gene 8402
Gm21929 X 150095681 to 150097386 1705 - pseudogene predicted gene, 21929
Tssr162302 X 150147492 to 150147503 11 + TSS region transcription start site region 162302
Gm20153 X 150157426 to 150177319 19893 - protein coding gene predicted gene, 20153
Tssr164350 X 150177281 to 150177284 3 - TSS region transcription start site region 164350