Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:14667782-16747845

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr160610 X 14680513 to 14680537 24 + TSS region transcription start site region 160610
n-TPtgg3 X 14702616 to 14702687 71 - tRNA gene nuclear encoded tRNA proline 3 (anticodon TGG)
Tssr160611 X 14714727 to 14714733 6 + TSS region transcription start site region 160611
Gm14505 X 14796735 to 14839980 43245 + lincRNA gene predicted gene 14505
DXMit163 X 14845811 to 14845908 97 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 163
DXMit72 X 14893710 to 14893848 138 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 72
Gm9435 X 14955101 to 14955974 873 - pseudogene predicted gene 9435
Tssr163022 X 14955990 to 14956005 15 - TSS region transcription start site region 163022
Ppp1r2-ps9 X 15110585 to 15111466 881 - pseudogene protein phosphatase 1, regulatory (inhibitor) subunit 2, pseudogene 9
Tssr163023 X 15111456 to 15111471 15 - TSS region transcription start site region 163023
Gm14519 X 15365179 to 15365490 311 + pseudogene predicted gene 14519
Gm14518 X 15522456 to 15522994 538 + pseudogene predicted gene 14518
Gm14517 X 15524425 to 15524761 336 - pseudogene predicted gene 14517
Gm25207 X 15685285 to 15685391 106 - snRNA gene predicted gene, 25207
Gm22464 X 15707782 to 15707845 63 + miRNA gene predicted gene, 22464
DXMit137 X 15750327 to 15750443 116 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 137
DXMit207 X 15799377 to 15799490 113 DNA segment DNA Segment, Chr X Massachusetts Institute of Technology 207
Gm23516 X 15896663 to 15896769 106 - snRNA gene predicted gene, 23516
Drr1 X 15922304 to 15939249 16945 - lincRNA gene developmentally regulated repeat element-containing transcript 1
Tssr160612 X 15926090 to 15926095 5 + TSS region transcription start site region 160612
DXMit190 X 16163208 to 16163313 105 DNA segment DNA Segment, Chr X, Massachusetts Institute of Technology 190
Cypt11 X 16233372 to 16234018 646 unclassified gene cysteine-rich perinuclear theca 11
Gm14520 X 16275521 to 16275907 386 - pseudogene predicted gene 14520
Gm14516 X 16379396 to 16379647 251 - pseudogene predicted gene 14516
Cypt1 X 16522869 to 16523689 820 + protein coding gene cysteine-rich perinuclear theca 1
Tssr160613 X 16522871 to 16522874 3 + TSS region transcription start site region 160613
Gm18109 X 16571194 to 16572212 1018 + pseudogene predicted gene, 18109
Csnk2a1-ps X 16610252 to 16611426 1174 + pseudogene casein kinase 2, alpha 1, pseudogene
Cpgi22637 X 16618271 to 16619059 788 CpG island CpG island 22637
Tssr160614 X 16618563 to 16618576 13 + TSS region transcription start site region 160614
Maoa X 16619698 to 16687812 68114 + protein coding gene monoamine oxidase A
Tssr160615 X 16619755 to 16619758 3 + TSS region transcription start site region 160615
Tssr160616 X 16619809 to 16619818 9 + TSS region transcription start site region 160616
Tssr160617 X 16619824 to 16619842 18 + TSS region transcription start site region 160617
Tssr160618 X 16634586 to 16634591 5 + TSS region transcription start site region 160618
Maob X 16709282 to 16817366 108084 - protein coding gene monoamine oxidase B