Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:145867259-148137366

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57 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm15057 X 145990742 to 145991275 533 + pseudogene predicted gene 15057
Gm6447 X 145994291 to 145995125 834 + pseudogene predicted gene 6447
Gm15062 X 146068808 to 146069174 366 + pseudogene predicted gene 15062
Gm4918 X 146095376 to 146096459 1083 + pseudogene predicted gene 4918
DXMit155 X 146119867 to 146119978 111 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 155
Hmgb1-ps2 X 146175942 to 146176577 635 + pseudogene high mobility group box 1, pseudogene 2
Gm18173 X 146177035 to 146242569 65534 - pseudogene predicted gene, 18173
Gm15061 X 146264949 to 146265977 1028 + pseudogene predicted gene 15061
Gm26151 X 146293776 to 146293835 59 - snRNA gene predicted gene, 26151
Tssr162297 X 146414223 to 146414224 1 + TSS region transcription start site region 162297
Gm15076 X 146519232 to 146519705 473 + pseudogene predicted gene 15076
Gm8261 X 146599751 to 146600958 1207 - pseudogene predicted gene 8261
Tssr162298 X 146610903 to 146610904 1 + TSS region transcription start site region 162298
Gm15075 X 146652038 to 146652514 476 - pseudogene predicted gene 15075
Gm15074 X 146654675 to 146655610 935 + pseudogene predicted gene 15074
DXMit34 X 146673077 to 146673327 250 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 34
Stpy X 146673077 to 159645105 12972028 heritable phenotypic marker stripey
Gm18174 X 146852607 to 146911187 58580 - pseudogene predicted gene, 18174
Gm4996 X 146933502 to 146934251 749 + pseudogene predicted gene 4996
Tssr162299 X 146962476 to 146962485 9 + TSS region transcription start site region 162299
Tssr162300 X 146962501 to 146962520 19 + TSS region transcription start site region 162300
Htr2c X 146962513 to 147197277 234764 + protein coding gene 5-hydroxytryptamine (serotonin) receptor 2C
Cpgi22982 X 146962662 to 146963226 564 CpG island CpG island 22982
Snora35 X 146994390 to 146994508 118 + snoRNA gene small nucleolar RNA, H/ACA box 35
Gm22650 X 146999405 to 146999509 104 + miRNA gene predicted gene, 22650
Mir764 X 147002259 to 147002366 107 + miRNA gene microRNA 764
Mir1912 X 147009441 to 147009527 86 + miRNA gene microRNA 1912
Mir1264 X 147010601 to 147010686 85 + miRNA gene microRNA 1264
Mir1298 X 147064905 to 147065002 97 + miRNA gene microRNA 1298
Gm24627 X 147106939 to 147107076 137 + miRNA gene predicted gene, 24627
1700094I16Rik X 147155432 to 147155984 552 unclassified gene RIKEN cDNA 1700094I16 gene
Mir448 X 147158210 to 147158321 111 + miRNA gene microRNA 448
Cpgi22983 X 147272740 to 147272966 226 CpG island CpG island 22983
Il13ra2 X 147383478 to 147429192 45714 - protein coding gene interleukin 13 receptor, alpha 2
Tssr164346 X 147428774 to 147428818 44 - TSS region transcription start site region 164346
Tssr164347 X 147429189 to 147429192 3 - TSS region transcription start site region 164347
Vmn1r239-ps X 147452748 to 147453707 959 - pseudogene vomeronasal 1 receptor 239, pseudogene
Lrch2 X 147470375 to 147554081 83706 - protein coding gene leucine-rich repeats and calponin homology (CH) domain containing 2
Gm25107 X 147484293 to 147484421 128 - snoRNA gene predicted gene, 25107
Cpgi22984 X 147553554 to 147553821 267 CpG island CpG island 22984
Cpgi22985 X 147553872 to 147554029 157 CpG island CpG island 22985
Tssr164348 X 147554051 to 147554087 36 - TSS region transcription start site region 164348
Tssr164349 X 147554097 to 147554110 13 - TSS region transcription start site region 164349
Tssr162301 X 147703008 to 147703033 25 + TSS region transcription start site region 162301
Gm16400 X 147720978 to 147722888 1910 + pseudogene predicted gene 16400
Gm15167 X 147733154 to 147733481 327 + pseudogene predicted gene 15167
Gm8289 X 147742082 to 147747608 5526 + pseudogene predicted gene 8289
DXMit152 X 147743763 to 147743881 118 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 152
Gm15128 X 147789653 to 147833116 43463 + protein coding gene predicted gene 15128
Gm6464 X 147843200 to 147844784 1584 - pseudogene predicted gene 6464
Gm15081 X 147927646 to 147928489 843 + pseudogene predicted gene 15081
Gm21928 X 147939842 to 147941547 1705 - pseudogene predicted gene, 21928
Gm15080 X 147992993 to 148033174 40181 + protein coding gene predicted gene 15080
Gm15108 X 148055249 to 148056743 1494 + pseudogene predicted gene 15108
Gm15110 X 148059921 to 148061106 1185 + pseudogene predicted gene 15110
Gm8303 X 148108570 to 148110331 1761 + pseudogene predicted gene 8303
Gm2286 X 148120744 to 148122491 1747 - pseudogene predicted gene 2286