Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:145273776-147313835

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52 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lhfpl1 X 145290359 to 145349089 58730 - protein coding gene lipoma HMGIC fusion partner-like 1
Tssr164336 X 145348894 to 145348928 34 - TSS region transcription start site region 164336
Tssr164337 X 145348932 to 145348944 12 - TSS region transcription start site region 164337
Amot X 145446425 to 145505181 58756 - protein coding gene angiomotin
Tssr164338 X 145480616 to 145480625 9 - TSS region transcription start site region 164338
Tssr164339 X 145480642 to 145480657 15 - TSS region transcription start site region 164339
Tssr164340 X 145480664 to 145480673 9 - TSS region transcription start site region 164340
Tssr164341 X 145480676 to 145480681 5 - TSS region transcription start site region 164341
Tssr164342 X 145505136 to 145505159 23 - TSS region transcription start site region 164342
Tssr164343 X 145505165 to 145505172 7 - TSS region transcription start site region 164343
Tssr164344 X 145505175 to 145505212 37 - TSS region transcription start site region 164344
Tssr5698 X 145505230 to 145505232 2 - TSS region transcription start site region 5698
Gm5644 X 145601837 to 145602301 464 - pseudogene predicted gene 5644
Tssr164345 X 145602326 to 145602328 2 - TSS region transcription start site region 164345
Gm15060 X 145646506 to 145647453 947 + pseudogene predicted gene 15060
Gm27659 X 145666973 to 145667070 97 - snRNA gene predicted gene, 27659
Tssr162296 X 145729913 to 145729917 4 + TSS region transcription start site region 162296
Gm15058 X 145753499 to 145753956 457 - pseudogene predicted gene 15058
Gm6446 X 145833317 to 145834134 817 + pseudogene predicted gene 6446
Gm15057 X 145990742 to 145991275 533 + pseudogene predicted gene 15057
Gm6447 X 145994291 to 145995125 834 + pseudogene predicted gene 6447
Gm15062 X 146068808 to 146069174 366 + pseudogene predicted gene 15062
Gm4918 X 146095376 to 146096459 1083 + pseudogene predicted gene 4918
DXMit155 X 146119867 to 146119978 111 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 155
Hmgb1-ps2 X 146175942 to 146176577 635 + pseudogene high mobility group box 1, pseudogene 2
Gm18173 X 146177035 to 146242569 65534 - pseudogene predicted gene, 18173
Gm15061 X 146264949 to 146265977 1028 + pseudogene predicted gene 15061
Gm26151 X 146293776 to 146293835 59 - snRNA gene predicted gene, 26151
Tssr162297 X 146414223 to 146414224 1 + TSS region transcription start site region 162297
Gm15076 X 146519232 to 146519705 473 + pseudogene predicted gene 15076
Gm8261 X 146599751 to 146600958 1207 - pseudogene predicted gene 8261
Tssr162298 X 146610903 to 146610904 1 + TSS region transcription start site region 162298
Gm15075 X 146652038 to 146652514 476 - pseudogene predicted gene 15075
Gm15074 X 146654675 to 146655610 935 + pseudogene predicted gene 15074
DXMit34 X 146673077 to 146673327 250 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 34
Stpy X 146673077 to 159645105 12972028 heritable phenotypic marker stripey
Gm18174 X 146852607 to 146911187 58580 - pseudogene predicted gene, 18174
Gm4996 X 146933502 to 146934251 749 + pseudogene predicted gene 4996
Tssr162299 X 146962476 to 146962485 9 + TSS region transcription start site region 162299
Tssr162300 X 146962501 to 146962520 19 + TSS region transcription start site region 162300
Htr2c X 146962513 to 147197277 234764 + protein coding gene 5-hydroxytryptamine (serotonin) receptor 2C
Cpgi22982 X 146962662 to 146963226 564 CpG island CpG island 22982
Snora35 X 146994390 to 146994508 118 + snoRNA gene small nucleolar RNA, H/ACA box 35
Gm22650 X 146999405 to 146999509 104 + miRNA gene predicted gene, 22650
Mir764 X 147002259 to 147002366 107 + miRNA gene microRNA 764
Mir1912 X 147009441 to 147009527 86 + miRNA gene microRNA 1912
Mir1264 X 147010601 to 147010686 85 + miRNA gene microRNA 1264
Mir1298 X 147064905 to 147065002 97 + miRNA gene microRNA 1298
Gm24627 X 147106939 to 147107076 137 + miRNA gene predicted gene, 24627
1700094I16Rik X 147155432 to 147155984 552 unclassified gene RIKEN cDNA 1700094I16 gene
Mir448 X 147158210 to 147158321 111 + miRNA gene microRNA 448
Cpgi22983 X 147272740 to 147272966 226 CpG island CpG island 22983