Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:144615165-146395172

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Trpc5 X 144381671 to 144688180 306509 - protein coding gene transient receptor potential cation channel, subfamily C, member 5
DXMit118 X 144632777 to 144632910 133 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 118
Rtl4 X 144688907 to 145122411 433504 + protein coding gene retrotransposon Gag like 4
Gm41903 X 144777680 to 144829176 51496 - pseudogene predicted gene, 41903
Gm26024 X 144820187 to 144820508 321 + unclassified non-coding RNA gene predicted gene, 26024
Gm8216 X 144847683 to 144848277 594 + pseudogene predicted gene 8216
Mir3472 X 145039344 to 145039414 70 + miRNA gene microRNA 3472
Gm25097 X 145160477 to 145160621 144 + snRNA gene predicted gene, 25097
Gm15073 X 145227155 to 145227788 633 - pseudogene predicted gene 15073
Gm6441 X 145264831 to 145265526 695 - pseudogene predicted gene 6441
Lhfpl1 X 145290359 to 145349089 58730 - protein coding gene lipoma HMGIC fusion partner-like 1
Tssr164336 X 145348894 to 145348928 34 - TSS region transcription start site region 164336
Tssr164337 X 145348932 to 145348944 12 - TSS region transcription start site region 164337
Amot X 145446425 to 145505181 58756 - protein coding gene angiomotin
Tssr164338 X 145480616 to 145480625 9 - TSS region transcription start site region 164338
Tssr164339 X 145480642 to 145480657 15 - TSS region transcription start site region 164339
Tssr164340 X 145480664 to 145480673 9 - TSS region transcription start site region 164340
Tssr164341 X 145480676 to 145480681 5 - TSS region transcription start site region 164341
Tssr164342 X 145505136 to 145505159 23 - TSS region transcription start site region 164342
Tssr164343 X 145505165 to 145505172 7 - TSS region transcription start site region 164343
Tssr164344 X 145505175 to 145505212 37 - TSS region transcription start site region 164344
Tssr5698 X 145505230 to 145505232 2 - TSS region transcription start site region 5698
Gm5644 X 145601837 to 145602301 464 - pseudogene predicted gene 5644
Tssr164345 X 145602326 to 145602328 2 - TSS region transcription start site region 164345
Gm15060 X 145646506 to 145647453 947 + pseudogene predicted gene 15060
Gm27659 X 145666973 to 145667070 97 - snRNA gene predicted gene, 27659
Tssr162296 X 145729913 to 145729917 4 + TSS region transcription start site region 162296
Gm15058 X 145753499 to 145753956 457 - pseudogene predicted gene 15058
Gm6446 X 145833317 to 145834134 817 + pseudogene predicted gene 6446
Gm15057 X 145990742 to 145991275 533 + pseudogene predicted gene 15057
Gm6447 X 145994291 to 145995125 834 + pseudogene predicted gene 6447
Gm15062 X 146068808 to 146069174 366 + pseudogene predicted gene 15062
Gm4918 X 146095376 to 146096459 1083 + pseudogene predicted gene 4918
DXMit155 X 146119867 to 146119978 111 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 155
Hmgb1-ps2 X 146175942 to 146176577 635 + pseudogene high mobility group box 1, pseudogene 2
Gm18173 X 146177035 to 146242569 65534 - pseudogene predicted gene, 18173
Gm15061 X 146264949 to 146265977 1028 + pseudogene predicted gene 15061
Gm26151 X 146293776 to 146293835 59 - snRNA gene predicted gene, 26151