Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:142850674-143829262

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47 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr164301 X 142852512 to 142852516 4 - TSS region transcription start site region 164301
Tssr164302 X 142852595 to 142852609 14 - TSS region transcription start site region 164302
Ammecr1 X 142853474 to 142966728 113254 - protein coding gene Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1
Gm44351 X 142962603 to 142962697 94 - miRNA gene predicted gene, 44351
Cpgi22979 X 142965799 to 142967204 1405 CpG island CpG island 22979
Tssr164303 X 142966665 to 142966675 10 - TSS region transcription start site region 164303
Tssr164304 X 142966709 to 142966734 25 - TSS region transcription start site region 164304
Tssr164305 X 142966745 to 142966762 17 - TSS region transcription start site region 164305
Tssr164306 X 142966781 to 142966790 9 - TSS region transcription start site region 164306
Tssr162255 X 143059106 to 143059115 9 + TSS region transcription start site region 162255
Rtl9 X 143099594 to 143104297 4703 + protein coding gene retrotransposon Gag like 9
Tssr164307 X 143183101 to 143183104 3 - TSS region transcription start site region 164307
Gm4760 X 143183508 to 143184537 1029 - pseudogene predicted gene 4760
DXMit35 X 143186238 to 143186395 157 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 35
Chrdl1 X 143285674 to 143394262 108588 - protein coding gene chordin-like 1
Tssr164308 X 143393850 to 143393861 11 - TSS region transcription start site region 164308
Tssr164309 X 143393878 to 143393891 13 - TSS region transcription start site region 164309
Cpgi22980 X 143393878 to 143394125 247 CpG island CpG island 22980
Tssr164310 X 143393893 to 143393922 29 - TSS region transcription start site region 164310
Gm23325 X 143413898 to 143414026 128 + snoRNA gene predicted gene, 23325
Tssr162256 X 143483006 to 143483015 9 + TSS region transcription start site region 162256
Tssr162257 X 143483029 to 143483057 28 + TSS region transcription start site region 162257
Tssr164311 X 143483043 to 143483052 9 - TSS region transcription start site region 164311
Tssr164312 X 143483062 to 143483122 60 - TSS region transcription start site region 164312
Tssr162258 X 143518400 to 143518414 14 + TSS region transcription start site region 162258
Tssr162259 X 143518513 to 143518528 15 + TSS region transcription start site region 162259
Tssr162260 X 143518539 to 143518556 17 + TSS region transcription start site region 162260
Tssr162261 X 143518562 to 143518574 12 + TSS region transcription start site region 162261
Tssr162262 X 143518576 to 143518599 23 + TSS region transcription start site region 162262
Pak3 X 143518591 to 143797796 279205 + protein coding gene p21 (RAC1) activated kinase 3
Tssr162263 X 143518671 to 143518703 32 + TSS region transcription start site region 162263
Tssr162264 X 143518706 to 143518717 11 + TSS region transcription start site region 162264
Tssr162265 X 143518726 to 143518737 11 + TSS region transcription start site region 162265
DXMit185 X 143621965 to 143622087 122 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 185
Tssr162266 X 143664333 to 143664354 21 + TSS region transcription start site region 162266
Tssr162267 X 143664357 to 143664362 5 + TSS region transcription start site region 162267
Tssr162268 X 143664365 to 143664399 34 + TSS region transcription start site region 162268
Tssr162269 X 143685049 to 143685073 24 + TSS region transcription start site region 162269
Tssr162270 X 143685077 to 143685085 8 + TSS region transcription start site region 162270
Tssr5697 X 143685092 to 143685100 8 + TSS region transcription start site region 5697
Tssr162271 X 143784232 to 143784235 3 + TSS region transcription start site region 162271
Tssr164313 X 143792498 to 143792501 3 - TSS region transcription start site region 164313
Capn6 X 143802236 to 143827412 25176 - protein coding gene calpain 6
Gm47298 X 143827223 to 143827344 121 - miRNA gene predicted gene, 47298
Tssr164314 X 143827306 to 143827367 61 - TSS region transcription start site region 164314
Tssr164315 X 143827378 to 143827386 8 - TSS region transcription start site region 164315
Tssr164316 X 143827391 to 143827402 11 - TSS region transcription start site region 164316