Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:140092742-140462755

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19 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Pih1h3b X 140062879 to 140106797 43918 + protein coding gene PIH1 domain containing 3B
Gm39537 X 140127729 to 140139265 11536 - lncRNA gene predicted gene, 39537
Gm15046 X 140178698 to 140277862 99164 - lincRNA gene predicted gene 15046
DXMit175 X 140205161 to 140205335 174 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 175
Cpgi22970 X 140277405 to 140278715 1310 CpG island CpG island 22970
Tssr162199 X 140277742 to 140277755 13 + TSS region transcription start site region 162199
Tssr162200 X 140277756 to 140277765 9 + TSS region transcription start site region 162200
DXMit131 X 140302317 to 140302463 146 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 131
Mhysq2 X 140302463 to 72410246 -67892217 QTL male hybrid sterility QTL 2
Mir3475 X 140310948 to 140311012 64 + miRNA gene microRNA 3475
Gm32113 X 140333846 to 140387121 53275 - lncRNA gene predicted gene, 32113
Frmpd3 X 140342263 to 140435467 93204 + protein coding gene FERM and PDZ domain containing 3
Tssr164234 X 140384704 to 140384706 2 - TSS region transcription start site region 164234
Tssr164235 X 140385858 to 140385870 12 - TSS region transcription start site region 164235
Gm8097 X 140445554 to 140446382 828 - pseudogene predicted gene 8097
Cpgi22971 X 140456585 to 140457284 699 CpG island CpG island 22971
Prps1 X 140456613 to 140476140 19527 + protein coding gene phosphoribosyl pyrophosphate synthetase 1
Tssr162201 X 140456618 to 140456632 14 + TSS region transcription start site region 162201
Tssr162202 X 140461119 to 140461123 4 + TSS region transcription start site region 162202