Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:139808852-140098853

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cldn2 X 139800828 to 139811386 10558 + protein coding gene claudin 2
Tssr162195 X 139809106 to 139809124 18 + TSS region transcription start site region 162195
Morc4 X 139821632 to 139871677 50045 - protein coding gene microrchidia 4
Tssr164221 X 139822414 to 139822419 5 - TSS region transcription start site region 164221
Tssr164222 X 139834738 to 139834744 6 - TSS region transcription start site region 164222
Cpgi22967 X 139870818 to 139871791 973 CpG island CpG island 22967
Tssr164223 X 139871478 to 139871489 11 - TSS region transcription start site region 164223
Tssr164224 X 139871507 to 139871515 8 - TSS region transcription start site region 164224
Tssr164225 X 139871615 to 139871630 15 - TSS region transcription start site region 164225
Tssr164226 X 139871637 to 139871670 33 - TSS region transcription start site region 164226
Rbm41 X 139889511 to 139998595 109084 - protein coding gene RNA binding motif protein 41
Gm15011 X 139892955 to 139894415 1460 + pseudogene predicted gene 15011
Tssr162196 X 139953852 to 139953853 1 + TSS region transcription start site region 162196
Tssr164227 X 139997848 to 139997864 16 - TSS region transcription start site region 164227
Tssr164228 X 139998519 to 139998566 47 - TSS region transcription start site region 164228
Nup62cl X 140006802 to 140062707 55905 - protein coding gene nucleoporin 62 C-terminal like
Cpgi22968 X 140061119 to 140061819 700 CpG island CpG island 22968
Cpgi22969 X 140062066 to 140062743 677 CpG island CpG island 22969
Tssr164229 X 140062295 to 140062340 45 - TSS region transcription start site region 164229
Tssr164230 X 140062448 to 140062460 12 - TSS region transcription start site region 164230
Tssr164231 X 140062550 to 140062583 33 - TSS region transcription start site region 164231
Tssr164232 X 140062584 to 140062605 21 - TSS region transcription start site region 164232
Tssr164233 X 140062719 to 140062726 7 - TSS region transcription start site region 164233
Tssr162197 X 140062874 to 140062889 15 + TSS region transcription start site region 162197
Pih1h3b X 140062879 to 140106797 43918 + protein coding gene PIH1 domain containing 3B
Tssr162198 X 140062904 to 140062928 24 + TSS region transcription start site region 162198
Gm6298 X 140084480 to 140085460 980 - pseudogene predicted gene 6298