Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:139256829-139706833

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54 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Platr21 X 139240226 to 139357738 117512 - lncRNA gene pluripotency associated transcript 21
Gm15002 X 139256924 to 139257611 687 - pseudogene predicted gene 15002
Tssr162144 X 139317690 to 139317717 27 + TSS region transcription start site region 162144
Trap1a X 139333683 to 139338169 4486 + protein coding gene tumor rejection antigen P1A
Tssr162145 X 139333837 to 139333870 33 + TSS region transcription start site region 162145
Tssr162146 X 139333907 to 139333918 11 + TSS region transcription start site region 162146
Tssr162147 X 139334153 to 139334162 9 + TSS region transcription start site region 162147
Cpgi22963 X 139334183 to 139334364 181 CpG island CpG island 22963
Tssr162148 X 139334249 to 139334256 7 + TSS region transcription start site region 162148
Tssr162149 X 139335491 to 139335494 3 + TSS region transcription start site region 162149
Tssr162150 X 139335843 to 139335856 13 + TSS region transcription start site region 162150
Tssr162151 X 139335890 to 139335901 11 + TSS region transcription start site region 162151
Tssr162152 X 139335907 to 139335931 24 + TSS region transcription start site region 162152
Tssr164216 X 139356734 to 139356744 10 - TSS region transcription start site region 164216
Tssr164217 X 139357703 to 139357740 37 - TSS region transcription start site region 164217
Gm8061 X 139358468 to 139359257 789 + pseudogene predicted gene 8061
Cpgi22964 X 139441076 to 139441241 165 CpG island CpG island 22964
Tswt X 139475662 to 152006342 12530680 QTL testis weight
DXMit4 X 139475662 to 139475768 106 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 4
Tssr162153 X 139480365 to 139480372 7 + TSS region transcription start site region 162153
Radx X 139480367 to 139554582 74215 + protein coding gene RPA1 related single stranded DNA binding protein, X-linked
Tssr162154 X 139480464 to 139480468 4 + TSS region transcription start site region 162154
Tssr162155 X 139481829 to 139481833 4 + TSS region transcription start site region 162155
Tssr162156 X 139524829 to 139524851 22 + TSS region transcription start site region 162156
Tssr162157 X 139563202 to 139563214 12 + TSS region transcription start site region 162157
Tssr162158 X 139563318 to 139563339 21 + TSS region transcription start site region 162158
Rnf128 X 139563340 to 139673145 109805 + protein coding gene ring finger protein 128
Tssr162159 X 139563695 to 139563746 51 + TSS region transcription start site region 162159
Tssr162160 X 139610209 to 139610238 29 + TSS region transcription start site region 162160
Cpgi22965 X 139610359 to 139611300 941 CpG island CpG island 22965
Tssr162161 X 139610596 to 139610600 4 + TSS region transcription start site region 162161
Tssr162162 X 139610612 to 139610632 20 + TSS region transcription start site region 162162
Tssr5685 X 139610660 to 139610672 12 + TSS region transcription start site region 5685
Tssr162163 X 139617384 to 139617395 11 + TSS region transcription start site region 162163
Tssr162164 X 139618524 to 139618532 8 + TSS region transcription start site region 162164
Tssr162165 X 139621504 to 139621521 17 + TSS region transcription start site region 162165
Tssr162166 X 139651699 to 139651718 19 + TSS region transcription start site region 162166
Gm24380 X 139654294 to 139654617 323 - unclassified non-coding RNA gene predicted gene, 24380
Tssr162167 X 139665420 to 139665432 12 + TSS region transcription start site region 162167
Tssr162168 X 139671772 to 139671787 15 + TSS region transcription start site region 162168
Tssr162169 X 139671851 to 139671862 11 + TSS region transcription start site region 162169
Tssr162170 X 139671921 to 139671933 12 + TSS region transcription start site region 162170
Tssr162171 X 139672010 to 139672025 15 + TSS region transcription start site region 162171
Tssr162172 X 139672030 to 139672051 21 + TSS region transcription start site region 162172
Tssr162173 X 139672108 to 139672117 9 + TSS region transcription start site region 162173
Tssr162174 X 139672122 to 139672154 32 + TSS region transcription start site region 162174
Tssr162175 X 139672190 to 139672205 15 + TSS region transcription start site region 162175
Tssr162176 X 139672269 to 139672296 27 + TSS region transcription start site region 162176
Tssr162177 X 139672347 to 139672361 14 + TSS region transcription start site region 162177
Gm6322 X 139676087 to 139677489 1402 - pseudogene predicted gene 6322
Tssr162178 X 139684954 to 139684968 14 + TSS region transcription start site region 162178
Tssr162179 X 139684980 to 139685082 102 + TSS region transcription start site region 162179
Tbc1d8b X 139684996 to 139753405 68409 + protein coding gene TBC1 domain family, member 8B
Cpgi22966 X 139685010 to 139685668 658 CpG island CpG island 22966