Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:139090890-139580901

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38 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
4930513O06Rik X 139086243 to 139093403 7160 + protein coding gene RIKEN cDNA 4930513O06 gene
Gm19226 X 139116525 to 139117508 983 + pseudogene predicted gene, 19226
Tssr162140 X 139179207 to 139179232 25 + TSS region transcription start site region 162140
4933428M09Rik X 139179228 to 139181009 1781 + protein coding gene RIKEN cDNA 4933428M09 gene
Tssr162141 X 139179243 to 139179246 3 + TSS region transcription start site region 162141
Gm15007 X 139201342 to 139202051 709 - pseudogene predicted gene 15007
Cpgi22962 X 139209865 to 139210294 429 CpG island CpG island 22962
Tssr162142 X 139210031 to 139210046 15 + TSS region transcription start site region 162142
Pwwp3b X 139210042 to 139238335 28293 + protein coding gene PWWP domain containing 3B
Tssr162143 X 139217168 to 139217190 22 + TSS region transcription start site region 162143
Platr21 X 139240226 to 139357738 117512 - lncRNA gene pluripotency associated transcript 21
Gm15002 X 139256924 to 139257611 687 - pseudogene predicted gene 15002
Tssr162144 X 139317690 to 139317717 27 + TSS region transcription start site region 162144
Trap1a X 139333683 to 139338169 4486 + protein coding gene tumor rejection antigen P1A
Tssr162145 X 139333837 to 139333870 33 + TSS region transcription start site region 162145
Tssr162146 X 139333907 to 139333918 11 + TSS region transcription start site region 162146
Tssr162147 X 139334153 to 139334162 9 + TSS region transcription start site region 162147
Cpgi22963 X 139334183 to 139334364 181 CpG island CpG island 22963
Tssr162148 X 139334249 to 139334256 7 + TSS region transcription start site region 162148
Tssr162149 X 139335491 to 139335494 3 + TSS region transcription start site region 162149
Tssr162150 X 139335843 to 139335856 13 + TSS region transcription start site region 162150
Tssr162151 X 139335890 to 139335901 11 + TSS region transcription start site region 162151
Tssr162152 X 139335907 to 139335931 24 + TSS region transcription start site region 162152
Tssr164216 X 139356734 to 139356744 10 - TSS region transcription start site region 164216
Tssr164217 X 139357703 to 139357740 37 - TSS region transcription start site region 164217
Gm8061 X 139358468 to 139359257 789 + pseudogene predicted gene 8061
Cpgi22964 X 139441076 to 139441241 165 CpG island CpG island 22964
Tswt X 139475662 to 152006342 12530680 QTL testis weight
DXMit4 X 139475662 to 139475768 106 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 4
Tssr162153 X 139480365 to 139480372 7 + TSS region transcription start site region 162153
Radx X 139480367 to 139554582 74215 + protein coding gene RPA1 related single stranded DNA binding protein, X-linked
Tssr162154 X 139480464 to 139480468 4 + TSS region transcription start site region 162154
Tssr162155 X 139481829 to 139481833 4 + TSS region transcription start site region 162155
Tssr162156 X 139524829 to 139524851 22 + TSS region transcription start site region 162156
Tssr162157 X 139563202 to 139563214 12 + TSS region transcription start site region 162157
Tssr162158 X 139563318 to 139563339 21 + TSS region transcription start site region 162158
Rnf128 X 139563340 to 139673145 109805 + protein coding gene ring finger protein 128
Tssr162159 X 139563695 to 139563746 51 + TSS region transcription start site region 162159