MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region X:137746319-138936467

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Il1rapl2	X	137570608 to 138846946	1276338	+	protein coding gene	interleukin 1 receptor accessory protein-like 2
Gm25393	X	137815156 to 137815440	284	-	unclassified non-coding RNA gene	predicted gene, 25393
Tssr164213	X	137950495 to 137950500	5	-	TSS region	transcription start site region 164213
Gm14989	X	138085607 to 138085813	206	-	pseudogene	predicted gene 14989
Gm24675	X	138145382 to 138145640	258	-	unclassified non-coding RNA gene	predicted gene, 24675
Tex13a	X	138208165 to 138209580	1415	-	protein coding gene	testis expressed 13A
Gm22057	X	138303307 to 138303413	106	-	snRNA gene	predicted gene, 22057
DXMit66	X	138341319 to 138341467	148		DNA segment	DNA segment, Chr X, Massachusetts Institute of Technology 66
Gm23958	X	138422715 to 138422819	104	-	snRNA gene	predicted gene, 23958
Gm15000	X	138522506 to 138523748	1242	-	pseudogene	predicted gene 15000
Gm15001	X	138742800 to 138743876	1076	-	pseudogene	predicted gene 15001
Cpgi22961	X	138914092 to 138914848	756		CpG island	CpG island 22961
Tssr162120	X	138914392 to 138914403	11	+	TSS region	transcription start site region 162120
Tssr162121	X	138914422 to 138914438	16	+	TSS region	transcription start site region 162121
Nrk	X	138914430 to 139010532	96102	+	protein coding gene	Nik related kinase
Tssr162122	X	138914445 to 138914460	15	+	TSS region	transcription start site region 162122
Tssr5684	X	138920337 to 138920338	1	+	TSS region	transcription start site region 5684
Tssr162123	X	138936323 to 138936329	6	+	TSS region	transcription start site region 162123