Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:13751307-14686841

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15 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cask X 13517080 to 13846784 329704 - protein coding gene calcium/calmodulin-dependent serine protein kinase (MAGUK family)
Cpgi22636 X 13845591 to 13847141 1550 CpG island CpG island 22636
Tssr163018 X 13846475 to 13846493 18 - TSS region transcription start site region 163018
Tssr163019 X 13846508 to 13846591 83 - TSS region transcription start site region 163019
Tssr163020 X 13846629 to 13846640 11 - TSS region transcription start site region 163020
Tssr163021 X 13846746 to 13846769 23 - TSS region transcription start site region 163021
n-TQttg1 X 13859166 to 13859237 71 - tRNA gene nuclear encoded tRNA glutamine 1 (anticodon TTG)
Gm5381 X 13927287 to 13929204 1917 - pseudogene predicted gene 5381
Gm25552 X 13985385 to 13985475 90 - snRNA gene predicted gene, 25552
DXMit139 X 14163503 to 14163652 149 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 139
Gm18170 X 14186307 to 14251841 65534 - pseudogene predicted gene, 18170
H2al1n X 14211148 to 14211657 509 + protein coding gene H2A histone family member L1N
Gm14867 X 14289739 to 14290604 865 + pseudogene predicted gene 14867
Gm25202 X 14315401 to 14315591 190 - snRNA gene predicted gene, 25202
Tssr160610 X 14680513 to 14680537 24 + TSS region transcription start site region 160610