Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:137340608-139076946

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44 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr162114 X 137358694 to 137358705 11 + TSS region transcription start site region 162114
Tssr162115 X 137358729 to 137358738 9 + TSS region transcription start site region 162115
Tssr162116 X 137374643 to 137374653 10 + TSS region transcription start site region 162116
Tssr5682 X 137537615 to 137537618 3 - TSS region transcription start site region 5682
Il1rapl2 X 137570608 to 138846946 1276338 + protein coding gene interleukin 1 receptor accessory protein-like 2
Cpgi22960 X 137570715 to 137571267 552 CpG island CpG island 22960
Tssr162117 X 137570780 to 137570784 4 + TSS region transcription start site region 162117
Tssr5683 X 137599534 to 137599537 3 + TSS region transcription start site region 5683
Gm14988 X 137638882 to 137642316 3434 - pseudogene predicted gene 14988
Tssr162118 X 137671390 to 137671393 3 + TSS region transcription start site region 162118
DXMit37 X 137684873 to 137685012 139 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 37
Tssr162119 X 137709006 to 137709009 3 + TSS region transcription start site region 162119
Gm25393 X 137815156 to 137815440 284 - unclassified non-coding RNA gene predicted gene, 25393
Tssr164213 X 137950495 to 137950500 5 - TSS region transcription start site region 164213
Gm14989 X 138085607 to 138085813 206 - pseudogene predicted gene 14989
Gm24675 X 138145382 to 138145640 258 - unclassified non-coding RNA gene predicted gene, 24675
Tex13a X 138208165 to 138209580 1415 - protein coding gene testis expressed 13A
Gm22057 X 138303307 to 138303413 106 - snRNA gene predicted gene, 22057
DXMit66 X 138341319 to 138341467 148 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 66
Gm23958 X 138422715 to 138422819 104 - snRNA gene predicted gene, 23958
Gm15000 X 138522506 to 138523748 1242 - pseudogene predicted gene 15000
Gm15001 X 138742800 to 138743876 1076 - pseudogene predicted gene 15001
Cpgi22961 X 138914092 to 138914848 756 CpG island CpG island 22961
Tssr162120 X 138914392 to 138914403 11 + TSS region transcription start site region 162120
Tssr162121 X 138914422 to 138914438 16 + TSS region transcription start site region 162121
Nrk X 138914430 to 139010532 96102 + protein coding gene Nik related kinase
Tssr162122 X 138914445 to 138914460 15 + TSS region transcription start site region 162122
Tssr5684 X 138920337 to 138920338 1 + TSS region transcription start site region 5684
Tssr162123 X 138936323 to 138936329 6 + TSS region transcription start site region 162123
Tssr162124 X 138975492 to 138975539 47 + TSS region transcription start site region 162124
Tssr162125 X 138985491 to 138985502 11 + TSS region transcription start site region 162125
Tssr162126 X 138999673 to 138999688 15 + TSS region transcription start site region 162126
Tssr162127 X 139007666 to 139007677 11 + TSS region transcription start site region 162127
Tssr162128 X 139008740 to 139008760 20 + TSS region transcription start site region 162128
Tssr162129 X 139009057 to 139009077 20 + TSS region transcription start site region 162129
Tssr162130 X 139009650 to 139009661 11 + TSS region transcription start site region 162130
Tssr162131 X 139009792 to 139009803 11 + TSS region transcription start site region 162131
Tssr162132 X 139009926 to 139009929 3 + TSS region transcription start site region 162132
Tssr162133 X 139009936 to 139009941 5 + TSS region transcription start site region 162133
Tssr162134 X 139010044 to 139010054 10 + TSS region transcription start site region 162134
Tssr162135 X 139010068 to 139010091 23 + TSS region transcription start site region 162135
Tssr162136 X 139010097 to 139010113 16 + TSS region transcription start site region 162136
Tssr162137 X 139010119 to 139010144 25 + TSS region transcription start site region 162137
Tssr162138 X 139010145 to 139010233 88 + TSS region transcription start site region 162138