MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region X:137119643-137629653

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Esx1	X	137115397 to 137122083	6686	-	protein coding gene	extraembryonic, spermatogenesis, homeobox 1
Cpgi22959	X	137118239 to 137120407	2168		CpG island	CpG island 22959
Tssr164209	X	137119706 to 137119714	8	-	TSS region	transcription start site region 164209
Tssr164210	X	137119805 to 137119819	14	-	TSS region	transcription start site region 164210
Tssr164211	X	137120128 to 137120133	5	-	TSS region	transcription start site region 164211
Tssr164212	X	137122135 to 137122171	36	-	TSS region	transcription start site region 164212
Gm15040	X	137128133 to 137129756	1623	+	pseudogene	predicted gene 15040
Gm15041	X	137130916 to 137131671	755	+	pseudogene	predicted gene 15041
Gm23679	X	137150815 to 137150933	118	+	snoRNA gene	predicted gene, 23679
Gm8036	X	137203486 to 137206528	3042	-	pseudogene	predicted gene 8036
Tssr162114	X	137358694 to 137358705	11	+	TSS region	transcription start site region 162114
Tssr162115	X	137358729 to 137358738	9	+	TSS region	transcription start site region 162115
Tssr162116	X	137374643 to 137374653	10	+	TSS region	transcription start site region 162116
Tssr5682	X	137537615 to 137537618	3	-	TSS region	transcription start site region 5682
Il1rapl2	X	137570608 to 138846946	1276338	+	protein coding gene	interleukin 1 receptor accessory protein-like 2
Cpgi22960	X	137570715 to 137571267	552		CpG island	CpG island 22960
Tssr162117	X	137570780 to 137570784	4	+	TSS region	transcription start site region 162117
Tssr5683	X	137599534 to 137599537	3	+	TSS region	transcription start site region 5683