Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:136813695-142313746

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424 genes found. Result truncated to 200 rows.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Dp(XTceal3-Plp1)1Gmh X 136590844 to 136838582 247738 chromosomal duplication duplication 1, Grace Hobson
Tssr162052 X 136820041 to 136820075 34 + TSS region transcription start site region 162052
Plp1 X 136822166 to 136838582 16416 + protein coding gene proteolipid protein (myelin) 1
Tssr162053 X 136822737 to 136822780 43 + TSS region transcription start site region 162053
Tssr162054 X 136822781 to 136822840 59 + TSS region transcription start site region 162054
Tssr162055 X 136822847 to 136822851 4 + TSS region transcription start site region 162055
Tssr162056 X 136831102 to 136831121 19 + TSS region transcription start site region 162056
Tssr162057 X 136831144 to 136831156 12 + TSS region transcription start site region 162057
Tssr162058 X 136831217 to 136831226 9 + TSS region transcription start site region 162058
Tssr162059 X 136832018 to 136832041 23 + TSS region transcription start site region 162059
Tssr162060 X 136832061 to 136832077 16 + TSS region transcription start site region 162060
Tssr164195 X 136832083 to 136832106 23 - TSS region transcription start site region 164195
Tssr162061 X 136832125 to 136832149 24 + TSS region transcription start site region 162061
Tssr162062 X 136833269 to 136833282 13 + TSS region transcription start site region 162062
Tssr162063 X 136833296 to 136833353 57 + TSS region transcription start site region 162063
Tssr162064 X 136833372 to 136833386 14 + TSS region transcription start site region 162064
Tssr162065 X 136833403 to 136833413 10 + TSS region transcription start site region 162065
Tssr162066 X 136834151 to 136834202 51 + TSS region transcription start site region 162066
Tssr162067 X 136835097 to 136835143 46 + TSS region transcription start site region 162067
Tssr162068 X 136836117 to 136836127 10 + TSS region transcription start site region 162068
Tssr162069 X 136836622 to 136836631 9 + TSS region transcription start site region 162069
Tssr162070 X 136836804 to 136836816 12 + TSS region transcription start site region 162070
Tssr162071 X 136836857 to 136836866 9 + TSS region transcription start site region 162071
Tssr162072 X 136836963 to 136836974 11 + TSS region transcription start site region 162072
Tssr162073 X 136837050 to 136837064 14 + TSS region transcription start site region 162073
Tssr162074 X 136837124 to 136837147 23 + TSS region transcription start site region 162074
Tssr162075 X 136837154 to 136837166 12 + TSS region transcription start site region 162075
Tssr162076 X 136837208 to 136837219 11 + TSS region transcription start site region 162076
Tssr162077 X 136837230 to 136837246 16 + TSS region transcription start site region 162077
Tssr162078 X 136837281 to 136837295 14 + TSS region transcription start site region 162078
Tssr162079 X 136837333 to 136837361 28 + TSS region transcription start site region 162079
Tssr162080 X 136837369 to 136837381 12 + TSS region transcription start site region 162080
Tssr162081 X 136837422 to 136837433 11 + TSS region transcription start site region 162081
Tssr162082 X 136837443 to 136837457 14 + TSS region transcription start site region 162082
Tssr164196 X 136837444 to 136837453 9 - TSS region transcription start site region 164196
Tssr162083 X 136837461 to 136837468 7 + TSS region transcription start site region 162083
Tssr162084 X 136837469 to 136837488 19 + TSS region transcription start site region 162084
Tssr162085 X 136837494 to 136837498 4 + TSS region transcription start site region 162085
Tssr162086 X 136837501 to 136837514 13 + TSS region transcription start site region 162086
Tssr162087 X 136837518 to 136837529 11 + TSS region transcription start site region 162087
Tssr162088 X 136837537 to 136837566 29 + TSS region transcription start site region 162088
Tssr162089 X 136837569 to 136837576 7 + TSS region transcription start site region 162089
Tssr162090 X 136837582 to 136837587 5 + TSS region transcription start site region 162090
Tssr162091 X 136837590 to 136837625 35 + TSS region transcription start site region 162091
Tssr164197 X 136837604 to 136837612 8 - TSS region transcription start site region 164197
Tssr162092 X 136837626 to 136837647 21 + TSS region transcription start site region 162092
Tssr164198 X 136837647 to 136837684 37 - TSS region transcription start site region 164198
Tssr162093 X 136837868 to 136837884 16 + TSS region transcription start site region 162093
Tssr162094 X 136837892 to 136837895 3 + TSS region transcription start site region 162094
Tssr164199 X 136837893 to 136837903 10 - TSS region transcription start site region 164199
Tssr162095 X 136837896 to 136837901 5 + TSS region transcription start site region 162095
Tssr162096 X 136837907 to 136837920 13 + TSS region transcription start site region 162096
Tssr162097 X 136837967 to 136837974 7 + TSS region transcription start site region 162097
Tssr162098 X 136837977 to 136837980 3 + TSS region transcription start site region 162098
Tssr162099 X 136837989 to 136838000 11 + TSS region transcription start site region 162099
Tssr162100 X 136838020 to 136838025 5 + TSS region transcription start site region 162100
Tssr164200 X 136838027 to 136838043 16 - TSS region transcription start site region 164200
Tssr162101 X 136838043 to 136838050 7 + TSS region transcription start site region 162101
Tssr162102 X 136838073 to 136838086 13 + TSS region transcription start site region 162102
Tssr162103 X 136838104 to 136838126 22 + TSS region transcription start site region 162103
DXNds2 X 136838113 to 136838288 175 DNA segment DNA segment, Chr X, Nuffield Department of Surgery 2
DXMit9 X 136838116 to 136838221 105 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 9
Tssr162104 X 136838128 to 136838144 16 + TSS region transcription start site region 162104
Tssr162105 X 136838161 to 136838172 11 + TSS region transcription start site region 162105
Rab9b X 136858151 to 136868540 10389 - protein coding gene RAB9B, member RAS oncogene family
Cpgi22955 X 136868275 to 136868677 402 CpG island CpG island 22955
Tssr164201 X 136868518 to 136868534 16 - TSS region transcription start site region 164201
Tssr164202 X 136868537 to 136868606 69 - TSS region transcription start site region 164202
Gm15026 X 136890258 to 136890715 457 + pseudogene predicted gene 15026
Gm15025 X 136920241 to 136920658 417 + pseudogene predicted gene 15025
Tssr162106 X 136927320 to 136927329 9 + TSS region transcription start site region 162106
H2bfm X 136927325 to 136928373 1048 + protein coding gene H2B histone family, member M
Gm6275 X 136929786 to 136930907 1121 + pseudogene predicted gene 6275
Tmsb15b2 X 136954988 to 136957979 2991 - protein coding gene thymosin beta 15b2
Tmsb15l X 136954988 to 136976869 21881 - protein coding gene thymosin beta 15b like
Tssr164203 X 136958000 to 136958028 28 - TSS region transcription start site region 164203
Tmsb15b1 X 136974022 to 136976874 2852 - protein coding gene thymosin beta 15b1
Tssr164204 X 136976833 to 136976857 24 - TSS region transcription start site region 164204
Tssr164205 X 136976859 to 136976883 24 - TSS region transcription start site region 164205
Slc25a53 X 136981116 to 137038302 57186 - protein coding gene solute carrier family 25, member 53
Zcchc18 X 136992379 to 136996923 4544 + protein coding gene zinc finger, CCHC domain containing 18
Cpgi22956 X 136992844 to 136993032 188 CpG island CpG island 22956
Tssr164206 X 136993027 to 136993058 31 - TSS region transcription start site region 164206
Tssr162107 X 136993147 to 136993216 69 + TSS region transcription start site region 162107
Tssr162108 X 136993222 to 136993244 22 + TSS region transcription start site region 162108
Tssr162109 X 136993253 to 136993272 19 + TSS region transcription start site region 162109
Tssr162110 X 136993281 to 136993308 27 + TSS region transcription start site region 162110
Tssr162111 X 136993323 to 136993330 7 + TSS region transcription start site region 162111
Gm15038 X 136998042 to 136998337 295 + pseudogene predicted gene 15038
Cpgi22957 X 137037994 to 137038442 448 CpG island CpG island 22957
Tssr162112 X 137038114 to 137038127 13 + TSS region transcription start site region 162112
Tssr164207 X 137038265 to 137038309 44 - TSS region transcription start site region 164207
Cpgi22958 X 137049295 to 137050060 765 CpG island CpG island 22958
Tssr162113 X 137049586 to 137049654 68 + TSS region transcription start site region 162113
Fam199x X 137049594 to 137082503 32909 + protein coding gene family with sequence similarity 199, X-linked
Gm25770 X 137093612 to 137093726 114 - snoRNA gene predicted gene, 25770
Gm8019 X 137099519 to 137100099 580 + pseudogene predicted gene 8019
Gm5761 X 137103889 to 137104722 833 - pseudogene predicted gene 5761
Gm15039 X 137107246 to 137108120 874 + pseudogene predicted gene 15039
Gm15042 X 137108605 to 137109487 882 + pseudogene predicted gene 15042
Gm15045 X 137109973 to 137110855 882 + pseudogene predicted gene 15045
Gm15043 X 137111340 to 137112882 1542 + pseudogene predicted gene 15043
Gm15044 X 137113527 to 137114106 579 + pseudogene predicted gene 15044
Esx1 X 137115397 to 137122083 6686 - protein coding gene extraembryonic, spermatogenesis, homeobox 1
Tssr164208 X 137117275 to 137117306 31 - TSS region transcription start site region 164208
Cpgi22959 X 137118239 to 137120407 2168 CpG island CpG island 22959
Tssr164209 X 137119706 to 137119714 8 - TSS region transcription start site region 164209
Tssr164210 X 137119805 to 137119819 14 - TSS region transcription start site region 164210
Tssr164211 X 137120128 to 137120133 5 - TSS region transcription start site region 164211
Tssr164212 X 137122135 to 137122171 36 - TSS region transcription start site region 164212
Gm15040 X 137128133 to 137129756 1623 + pseudogene predicted gene 15040
Gm15041 X 137130916 to 137131671 755 + pseudogene predicted gene 15041
Gm23679 X 137150815 to 137150933 118 + snoRNA gene predicted gene, 23679
Gm8036 X 137203486 to 137206528 3042 - pseudogene predicted gene 8036
Tssr162114 X 137358694 to 137358705 11 + TSS region transcription start site region 162114
Tssr162115 X 137358729 to 137358738 9 + TSS region transcription start site region 162115
Tssr162116 X 137374643 to 137374653 10 + TSS region transcription start site region 162116
Tssr5682 X 137537615 to 137537618 3 - TSS region transcription start site region 5682
Il1rapl2 X 137570608 to 138846946 1276338 + protein coding gene interleukin 1 receptor accessory protein-like 2
Cpgi22960 X 137570715 to 137571267 552 CpG island CpG island 22960
Tssr162117 X 137570780 to 137570784 4 + TSS region transcription start site region 162117
Tssr5683 X 137599534 to 137599537 3 + TSS region transcription start site region 5683
Gm14988 X 137638882 to 137642316 3434 - pseudogene predicted gene 14988
Tssr162118 X 137671390 to 137671393 3 + TSS region transcription start site region 162118
DXMit37 X 137684873 to 137685012 139 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 37
Tssr162119 X 137709006 to 137709009 3 + TSS region transcription start site region 162119
Gm25393 X 137815156 to 137815440 284 - unclassified non-coding RNA gene predicted gene, 25393
Tssr164213 X 137950495 to 137950500 5 - TSS region transcription start site region 164213
Gm14989 X 138085607 to 138085813 206 - pseudogene predicted gene 14989
Gm24675 X 138145382 to 138145640 258 - unclassified non-coding RNA gene predicted gene, 24675
Tex13a X 138208165 to 138209580 1415 - protein coding gene testis expressed 13A
Gm22057 X 138303307 to 138303413 106 - snRNA gene predicted gene, 22057
DXMit66 X 138341319 to 138341467 148 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 66
Gm23958 X 138422715 to 138422819 104 - snRNA gene predicted gene, 23958
Gm15000 X 138522506 to 138523748 1242 - pseudogene predicted gene 15000
Gm15001 X 138742800 to 138743876 1076 - pseudogene predicted gene 15001
Cpgi22961 X 138914092 to 138914848 756 CpG island CpG island 22961
Tssr162120 X 138914392 to 138914403 11 + TSS region transcription start site region 162120
Tssr162121 X 138914422 to 138914438 16 + TSS region transcription start site region 162121
Nrk X 138914430 to 139010532 96102 + protein coding gene Nik related kinase
Tssr162122 X 138914445 to 138914460 15 + TSS region transcription start site region 162122
Tssr5684 X 138920337 to 138920338 1 + TSS region transcription start site region 5684
Tssr162123 X 138936323 to 138936329 6 + TSS region transcription start site region 162123
Tssr162124 X 138975492 to 138975539 47 + TSS region transcription start site region 162124
Tssr162125 X 138985491 to 138985502 11 + TSS region transcription start site region 162125
Tssr162126 X 138999673 to 138999688 15 + TSS region transcription start site region 162126
Tssr162127 X 139007666 to 139007677 11 + TSS region transcription start site region 162127
Tssr162128 X 139008740 to 139008760 20 + TSS region transcription start site region 162128
Tssr162129 X 139009057 to 139009077 20 + TSS region transcription start site region 162129
Tssr162130 X 139009650 to 139009661 11 + TSS region transcription start site region 162130
Tssr162131 X 139009792 to 139009803 11 + TSS region transcription start site region 162131
Tssr162132 X 139009926 to 139009929 3 + TSS region transcription start site region 162132
Tssr162133 X 139009936 to 139009941 5 + TSS region transcription start site region 162133
Tssr162134 X 139010044 to 139010054 10 + TSS region transcription start site region 162134
Tssr162135 X 139010068 to 139010091 23 + TSS region transcription start site region 162135
Tssr162136 X 139010097 to 139010113 16 + TSS region transcription start site region 162136
Tssr162137 X 139010119 to 139010144 25 + TSS region transcription start site region 162137
Tssr162138 X 139010145 to 139010233 88 + TSS region transcription start site region 162138
Serpina7 X 139079257 to 139085236 5979 - protein coding gene serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 7
Tssr164214 X 139085211 to 139085225 14 - TSS region transcription start site region 164214
Tssr164215 X 139085230 to 139085247 17 - TSS region transcription start site region 164215
Tssr162139 X 139086226 to 139086250 24 + TSS region transcription start site region 162139
4930513O06Rik X 139086243 to 139093403 7160 + protein coding gene RIKEN cDNA 4930513O06 gene
Gm19226 X 139116525 to 139117508 983 + pseudogene predicted gene, 19226
Tssr162140 X 139179207 to 139179232 25 + TSS region transcription start site region 162140
4933428M09Rik X 139179228 to 139181009 1781 + protein coding gene RIKEN cDNA 4933428M09 gene
Tssr162141 X 139179243 to 139179246 3 + TSS region transcription start site region 162141
Gm15007 X 139201342 to 139202051 709 - pseudogene predicted gene 15007
Cpgi22962 X 139209865 to 139210294 429 CpG island CpG island 22962
Tssr162142 X 139210031 to 139210046 15 + TSS region transcription start site region 162142
Pwwp3b X 139210042 to 139238335 28293 + protein coding gene PWWP domain containing 3B
Tssr162143 X 139217168 to 139217190 22 + TSS region transcription start site region 162143
Platr21 X 139240226 to 139357738 117512 - lncRNA gene pluripotency associated transcript 21
Gm15002 X 139256924 to 139257611 687 - pseudogene predicted gene 15002
Tssr162144 X 139317690 to 139317717 27 + TSS region transcription start site region 162144
Trap1a X 139333683 to 139338169 4486 + protein coding gene tumor rejection antigen P1A
Tssr162145 X 139333837 to 139333870 33 + TSS region transcription start site region 162145
Tssr162146 X 139333907 to 139333918 11 + TSS region transcription start site region 162146
Tssr162147 X 139334153 to 139334162 9 + TSS region transcription start site region 162147
Cpgi22963 X 139334183 to 139334364 181 CpG island CpG island 22963
Tssr162148 X 139334249 to 139334256 7 + TSS region transcription start site region 162148
Tssr162149 X 139335491 to 139335494 3 + TSS region transcription start site region 162149
Tssr162150 X 139335843 to 139335856 13 + TSS region transcription start site region 162150
Tssr162151 X 139335890 to 139335901 11 + TSS region transcription start site region 162151
Tssr162152 X 139335907 to 139335931 24 + TSS region transcription start site region 162152
Tssr164216 X 139356734 to 139356744 10 - TSS region transcription start site region 164216
Tssr164217 X 139357703 to 139357740 37 - TSS region transcription start site region 164217
Gm8061 X 139358468 to 139359257 789 + pseudogene predicted gene 8061
Cpgi22964 X 139441076 to 139441241 165 CpG island CpG island 22964
DXMit4 X 139475662 to 139475768 106 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 4
Tswt X 139475662 to 152006342 12530680 QTL testis weight
Tssr162153 X 139480365 to 139480372 7 + TSS region transcription start site region 162153
Radx X 139480367 to 139554582 74215 + protein coding gene RPA1 related single stranded DNA binding protein, X-linked
Tssr162154 X 139480464 to 139480468 4 + TSS region transcription start site region 162154
Tssr162155 X 139481829 to 139481833 4 + TSS region transcription start site region 162155
Tssr162156 X 139524829 to 139524851 22 + TSS region transcription start site region 162156
Tssr162157 X 139563202 to 139563214 12 + TSS region transcription start site region 162157
Tssr162158 X 139563318 to 139563339 21 + TSS region transcription start site region 162158
Rnf128 X 139563340 to 139673145 109805 + protein coding gene ring finger protein 128
Tssr162159 X 139563695 to 139563746 51 + TSS region transcription start site region 162159