Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:136313411-136823922

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65 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Nsa2-ps2 X 136328299 to 136329068 769 + pseudogene NSA2 ribosome biogenesis homolog, pseudogene 2
Gm14997 X 136329845 to 136330474 629 - pseudogene predicted gene 14997
Gm4917 X 136338065 to 136338711 646 + pseudogene predicted gene 4917
Tssr162044 X 136340053 to 136340073 20 + TSS region transcription start site region 162044
Gm7973 X 136340181 to 136340668 487 + pseudogene predicted gene 7973
Gm14994 X 136348185 to 136349266 1081 - pseudogene predicted gene 14994
Gm14999 X 136356655 to 136357278 623 - pseudogene predicted gene 14999
n-TAtgc2 X 136357602 to 136357673 71 + tRNA gene nuclear encoded tRNA alanine 2 (anticodon TGC)
Gm14998 X 136366756 to 136367250 494 + pseudogene predicted gene 14998
Gm14993 X 136367249 to 136367412 163 - pseudogene predicted gene 14993
n-TAcgc4 X 136367721 to 136367792 71 + tRNA gene nuclear encoded tRNA alanine 4 (anticodon CGC)
n-TAcgc7 X 136379366 to 136379437 71 - tRNA gene nuclear encoded tRNA alanine 7 (anticodon CGC)
Gm14992 X 136379912 to 136380423 511 - pseudogene predicted gene 14992
n-TAtgc6 X 136380747 to 136380818 71 + tRNA gene nuclear encoded tRNA alanine 6 (anticodon TGC)
n-TAcgc6 X 136395522 to 136395593 71 - tRNA gene nuclear encoded tRNA alanine 6 (anticodon CGC)
Gm14996 X 136396068 to 136396579 511 - pseudogene predicted gene 14996
n-TAtgc7 X 136396904 to 136396975 71 + tRNA gene nuclear encoded tRNA alanine 7 (anticodon TGC)
n-TAcgc5 X 136401868 to 136401939 71 + tRNA gene nuclear encoded tRNA alanine 5 (anticodon CGC)
n-TAtgc4 X 136430365 to 136430436 71 - tRNA gene nuclear encoded tRNA alanine 4 (anticodon TGC)
Gm14990 X 136430731 to 136431175 444 + pseudogene predicted gene 14990
Gm14995 X 136438151 to 136438541 390 - pseudogene predicted gene 14995
Kir3dl2 X 136448107 to 136544056 95949 - protein coding gene killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 2
Gm14991 X 136486970 to 136488884 1914 + pseudogene predicted gene 14991
Kir3dl1 X 136517999 to 136534306 16307 + protein coding gene killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 1
Gm15006 X 136544874 to 136545995 1121 + pseudogene predicted gene 15006
Gm15003 X 136552985 to 136553430 445 - pseudogene predicted gene 15003
n-TAtgc3 X 136553725 to 136553796 71 + tRNA gene nuclear encoded tRNA alanine 3 (anticodon TGC)
n-TAcgc2 X 136567865 to 136567936 71 - tRNA gene nuclear encoded tRNA alanine 2 (anticodon CGC)
Gm15005 X 136568411 to 136568922 511 - pseudogene predicted gene 15005
n-TAtgc8 X 136569246 to 136569317 71 + tRNA gene nuclear encoded tRNA alanine 8 (anticodon TGC)
n-TAcgc1 X 136569763 to 136569835 72 + tRNA gene nuclear encoded tRNA alanine 1 (anticodon CGC)
Gm15004 X 136583864 to 136584493 629 - pseudogene predicted gene 15004
n-TAtgc1 X 136590365 to 136590436 71 + tRNA gene nuclear encoded tRNA alanine 1 (anticodon TGC)
Tssr162045 X 136590841 to 136590866 25 + TSS region transcription start site region 162045
Tceal3 X 136590844 to 136668377 77533 + protein coding gene transcription elongation factor A (SII)-like 3
Dp(XTceal3-Plp1)1Gmh X 136590844 to 136838582 247738 chromosomal duplication duplication 1, Grace Hobson
Tssr162046 X 136666387 to 136666479 92 + TSS region transcription start site region 162046
Gm15010 X 136701246 to 136701652 406 - pseudogene predicted gene 15010
Gm39536 X 136703535 to 136708517 4982 - lncRNA gene predicted gene, 39536
Gm23068 X 136704178 to 136704470 292 + unclassified non-coding RNA gene predicted gene, 23068
Tceal1 X 136707969 to 136709873 1904 + protein coding gene transcription elongation factor A (SII)-like 1
Tssr162047 X 136707976 to 136708040 64 + TSS region transcription start site region 162047
Tssr162048 X 136708044 to 136708064 20 + TSS region transcription start site region 162048
Tssr162049 X 136708389 to 136708404 15 + TSS region transcription start site region 162049
Morf4l2 X 136732942 to 136743686 10744 - protein coding gene mortality factor 4 like 2
Tssr164187 X 136733199 to 136733204 5 - TSS region transcription start site region 164187
Tssr164188 X 136741094 to 136741115 21 - TSS region transcription start site region 164188
Tssr164189 X 136741120 to 136741128 8 - TSS region transcription start site region 164189
Tssr164190 X 136741279 to 136741307 28 - TSS region transcription start site region 164190
Tssr164191 X 136741433 to 136741449 16 - TSS region transcription start site region 164191
Cpgi22954 X 136741496 to 136742245 749 CpG island CpG island 22954
Tssr162050 X 136741821 to 136741864 43 + TSS region transcription start site region 162050
Tssr164192 X 136742056 to 136742076 20 - TSS region transcription start site region 164192
BC065397 X 136742957 to 136803364 60407 + lncRNA gene cDNA sequence BC065397
Tssr164193 X 136743141 to 136743145 4 - TSS region transcription start site region 164193
Tssr164194 X 136743675 to 136743692 17 - TSS region transcription start site region 164194
Glra4 X 136757674 to 136780141 22467 - protein coding gene glycine receptor, alpha 4 subunit
DXMit151 X 136788209 to 136788421 212 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 151
Tssr162051 X 136788461 to 136788504 43 + TSS region transcription start site region 162051
Gm15009 X 136802912 to 136803233 321 + pseudogene predicted gene 15009
Tssr162052 X 136820041 to 136820075 34 + TSS region transcription start site region 162052
Plp1 X 136822166 to 136838582 16416 + protein coding gene proteolipid protein (myelin) 1
Tssr162053 X 136822737 to 136822780 43 + TSS region transcription start site region 162053
Tssr162054 X 136822781 to 136822840 59 + TSS region transcription start site region 162054
Tssr162055 X 136822847 to 136822851 4 + TSS region transcription start site region 162055