Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region X:136150543-136300555

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
DXMit38 X 136158013 to 136158148 135 DNA segment DNA segment, Chr X, Massachusetts Institute of Technology 38
Tceal8 X 136168984 to 136172251 3267 - protein coding gene transcription elongation factor A (SII)-like 8
Tssr164181 X 136170985 to 136171008 23 - TSS region transcription start site region 164181
Tssr164182 X 136172164 to 136172194 30 - TSS region transcription start site region 164182
Tssr164183 X 136172195 to 136172228 33 - TSS region transcription start site region 164183
Tssr164184 X 136172233 to 136172244 11 - TSS region transcription start site region 164184
Mir6383 X 136183245 to 136183360 115 + miRNA gene microRNA 6383
Gm41901 X 136189900 to 136200652 10752 - lncRNA gene predicted gene, 41901
n-TKctt19 X 136195732 to 136195804 72 - tRNA gene nuclear encoded tRNA lysine 19 (anticodon CTT)
Tceal5 X 136200948 to 136203851 2903 - protein coding gene transcription elongation factor A (SII)-like 5
Tssr162033 X 136201666 to 136201727 61 + TSS region transcription start site region 162033
Tssr164185 X 136203816 to 136203926 110 - TSS region transcription start site region 164185
Bex1 X 136213972 to 136215513 1541 - protein coding gene brain expressed X-linked 1
Tceal7 X 136214914 to 136226100 11186 + protein coding gene transcription elongation factor A (SII)-like 7
Cpgi22952 X 136215024 to 136215239 215 CpG island CpG island 22952
Tssr162034 X 136224035 to 136224053 18 + TSS region transcription start site region 162034
Tssr162035 X 136225543 to 136225555 12 + TSS region transcription start site region 162035
Gm39535 X 136242830 to 136244986 2156 - lncRNA gene predicted gene, 39535
Tssr162036 X 136245065 to 136245102 37 + TSS region transcription start site region 162036
Tceal9 X 136245080 to 136247139 2059 + protein coding gene transcription elongation factor A like 9
Tssr162037 X 136245117 to 136245175 58 + TSS region transcription start site region 162037
Cpgi22953 X 136269850 to 136270035 185 CpG island CpG island 22953
Bex3 X 136270253 to 136271978 1725 + protein coding gene brain expressed X-linked 3
Tssr162038 X 136270258 to 136270269 11 + TSS region transcription start site region 162038
Tssr162039 X 136270278 to 136270283 5 + TSS region transcription start site region 162039
Tssr162040 X 136270302 to 136270352 50 + TSS region transcription start site region 162040
Tssr162041 X 136271359 to 136271394 35 + TSS region transcription start site region 162041
Tssr164186 X 136271430 to 136271453 23 - TSS region transcription start site region 164186
Tssr162042 X 136271449 to 136271467 18 + TSS region transcription start site region 162042
Tssr162043 X 136271668 to 136271687 19 + TSS region transcription start site region 162043
n-R5s12 X 136277505 to 136277623 118 + rRNA gene nuclear encoded rRNA 5S 12